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D8HR32 (D8HR32_AMYMU) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length497 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D8HR32 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: B4D82DF45D3F53B9

FASTA49751,072
        10         20         30         40         50         60 
MKITRLAQGL LAGLLGCAAL AVPAAIGAAT AQADVASTLV FNKDTEGHDC YRIPTIVKAN 

        70         80         90        100        110        120 
NGDLLAFAEG RNGGAHACAD LGKIDLVMKR STDGGKTWGA LNTVITAFGD TKGNPAPIVI 

       130        140        150        160        170        180 
PGSDRIVLLS TMQCYTNPDC GRIPRVSISE DNGKTWGAPK TLTTELGFSA APGWLATGPS 

       190        200        210        220        230        240 
HGIVLTRGAH KGRLVAGMSY SNIGALVYSD DKGSTWHLGA TDKPTTSAMN PQEISVTELR 

       250        260        270        280        290        300 
DGRIYAAARN QANDGNKCLE DGTHNRAFAI SSDDGATFSS KFDFATDLVA PTVEGSTARM 

       310        320        330        340        350        360 
SATDTGGKYN RILFAAPSVC GEREGLRVHS SFDEGANWTG TAGSLLVWGQ GAAYSDMVQL 

       370        380        390        400        410        420 
SQSSVGVLFE VGPTEHPYDA IRFAAVSDAA LGAPACGGGY SVIDSAPLGT GGAAGTVYLS 

       430        440        450        460        470        480 
YNAANGQNCV STMKNASAGT ATATAAYLEV KGSARQTDSG SFSYFAGPVK ATAADKCVKW 

       490 
GGAAGGQVYD SQFEHCS 

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References

[1]"Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism."
Zhao W., Zhong Y., Yuan H., Wang J., Zheng H., Wang Y., Cen X., Xu F., Bai J., Han X., Lu G., Zhu Y., Shao Z., Yan H., Li C., Peng N., Zhang Z., Zhang Y. expand/collapse author list , Lin W., Fan Y., Qin Z., Hu Y., Zhu B., Wang S., Ding X., Zhao G.P.
Cell Res. 20:1096-1108(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: U-32.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002000 Genomic DNA. Translation: ADJ45934.1.
RefSeqYP_003766336.1. NC_014318.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADJ45934; ADJ45934; AMED_4157.
GeneID9438346.
KEGGamd:AMED_4157.
PATRIC42155505. VBIAmyMed151214_4299.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000252336.
KOK01186.
OMAMYLAREC.

Enzyme and pathway databases

BioCycAMED749927:GCZN-4137-MONOMER.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
InterProIPR026948. Sialidase/anhydrosialidase.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PTHR10628:SF5. PTHR10628:SF5. 1 hit.
SUPFAMSSF50939. SSF50939. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD8HR32_AMYMU
AccessionPrimary (citable) accession number: D8HR32
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: April 16, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)