Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

D8GJ42

- D8GJ42_CLOLD

UniProt

D8GJ42 - D8GJ42_CLOLD

Protein

Elongation factor Tu

Gene

tuf1

Organism
Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 28 (01 Oct 2014)
      Sequence version 1 (05 Oct 2010)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi19 – 268GTPUniRule annotation
    Nucleotide bindingi81 – 855GTPUniRule annotation
    Nucleotide bindingi136 – 1394GTPUniRule annotation

    GO - Molecular functioni

    1. GTPase activity Source: InterPro
    2. GTP binding Source: UniProtKB-HAMAP
    3. translation elongation factor activity Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Elongation factorUniRule annotationImported

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    GTP-bindingUniRule annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciCLJU748727:GHMO-4105-MONOMER.
    CLJU748727:GHMO-4119-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Elongation factor TuUniRule annotation
    Short name:
    EF-TuUniRule annotation
    Gene namesi
    Name:tuf1Imported
    Synonyms:tufUniRule annotation, tuf2Imported
    Ordered Locus Names:CLJU_c41060Imported, CLJU_c41200Imported
    OrganismiClostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC)Imported
    Taxonomic identifieri748727 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
    ProteomesiUP000001656: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotation

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliD8GJ42.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily.UniRule annotation
    Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000229290.
    KOiK02358.
    OMAiSSYSISH.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    HAMAPiMF_00118_B. EF_Tu_B.
    InterProiIPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view]
    PfamiPF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view]
    PRINTSiPR00315. ELONGATNFCT.
    SUPFAMiSSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEiPS00301. EFACTOR_GTP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D8GJ42-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSKEKYERTK PHVNIGTIGH VDHGKTTLTA AITMVLSKEG KAAATKYDEI    50
    DKAPEEKERG ITINTAHVEY ETDKRHYAHV DCPGHADYVK NMITGAAQMD 100
    GAILVVSAAD GPMPQTREHI LLASRVGVQY IVVFLNKSDQ VDDPELLELV 150
    EMEVRELLSE YGFPGDDVPI IVGSALKVLE NPDDPETTKC IHELMDAVDE 200
    YIPTPERPTD KDFLMPIEDV FTITGRGTVA TGRVESGVLK IGDELEIVGL 250
    KEEKKKTTCT GVEMFRKLLD QAMAGDNIGV LLRGIQRDEV ERGQVLAKPG 300
    TVHPHKKFVG QVYVLKKEEG GRHTPFFNGY RPQFYFRTTD VTGSIALPEG 350
    VEMVMPGDHI DMNVELITPV AMHEGLRFAI REGGRTVGSG VVTTITE 397
    Length:397
    Mass (Da):43,791
    Last modified:October 5, 2010 - v1
    Checksum:iD3E4795EB815DA8A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001666 Genomic DNA. Translation: ADK17130.1.
    CP001666 Genomic DNA. Translation: ADK17144.1.
    RefSeqiYP_003782232.1. NC_014328.1.
    YP_003782246.1. NC_014328.1.

    Genome annotation databases

    EnsemblBacteriaiADK17130; ADK17130; CLJU_c41060.
    ADK17144; ADK17144; CLJU_c41200.
    GeneIDi9447722.
    9447736.
    KEGGiclj:CLJU_c41060.
    clj:CLJU_c41200.
    PATRICi42489653. VBICloLju82977_4165.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001666 Genomic DNA. Translation: ADK17130.1 .
    CP001666 Genomic DNA. Translation: ADK17144.1 .
    RefSeqi YP_003782232.1. NC_014328.1.
    YP_003782246.1. NC_014328.1.

    3D structure databases

    ProteinModelPortali D8GJ42.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADK17130 ; ADK17130 ; CLJU_c41060 .
    ADK17144 ; ADK17144 ; CLJU_c41200 .
    GeneIDi 9447722.
    9447736.
    KEGGi clj:CLJU_c41060.
    clj:CLJU_c41200.
    PATRICi 42489653. VBICloLju82977_4165.

    Phylogenomic databases

    HOGENOMi HOG000229290.
    KOi K02358.
    OMAi SSYSISH.

    Enzyme and pathway databases

    BioCyci CLJU748727:GHMO-4105-MONOMER.
    CLJU748727:GHMO-4119-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    HAMAPi MF_00118_B. EF_Tu_B.
    InterProi IPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view ]
    Pfami PF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view ]
    PRINTSi PR00315. ELONGATNFCT.
    SUPFAMi SSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEi PS00301. EFACTOR_GTP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Koepke M., Hujer S., Held C., Wiezer A., Liesegang H., Ehrenreich A., Gottschalk G., Duerre P.
      Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DSM 13528Imported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 55383 / DSM 13528 / PETCImported and DSM 13528Imported.

    Entry informationi

    Entry nameiD8GJ42_CLOLD
    AccessioniPrimary (citable) accession number: D8GJ42
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 5, 2010
    Last sequence update: October 5, 2010
    Last modified: October 1, 2014
    This is version 28 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3