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D8F2H3 (D8F2H3_9DELT) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:NPH_1834 EMBL EFK10026.1
Organismdelta proteobacterium NaphS2 EMBL EFK10026.1
Taxonomic identifier88274 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteria

Protein attributes

Sequence length507 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EFK10026.1

Sequences

Sequence LengthMass (Da)Tools
D8F2H3 [UniParc].

Last modified October 5, 2010. Version 1.
Checksum: D0CAF7ED831FDD7B

FASTA50757,312
        10         20         30         40         50         60 
MPTLQEKVAE SFAVLKKIQD EGIVAIQTKN MTRTHRERLV KSGFIKEVMK GWYISARPEE 

        70         80         90        100        110        120 
QTGESTAWYA SFWGFCGDYL NSRFGNQWCL SPEQSLRIHG ENWSVPNQLP VRTPTGGNKP 

       130        140        150        160        170        180 
ISLLHGTSIM DVRLNLPDRK DMEIKENIRI MTLPAALISC APAYYSNNTV EARAALSMIS 

       190        200        210        220        230        240 
DASGILHKLL EGGHSTVAGR LAGAFRNIGK NVIADDIIEA MRTAGYNITE NDPFEEKPVT 

       250        260        270        280        290        300 
ISSERELSPH VNRIRMYWAD MRGIVLENFP QAPLVRRNTD EYLKYVDEIY PADAYHSLSI 

       310        320        330        340        350        360 
EGYHVSELLI ERVRSGNWDP ETNRKDKAYA DALAARGYWQ AFQAVKKSLI KILNKNSPGT 

       370        380        390        400        410        420 
VVSNDHSIWY RELFAPSVSV GLMGASDLAG YRNQPVYIRK SRHVPPRCEA LRDLMPAFFS 

       430        440        450        460        470        480 
LLENEAEPAV NAVLGHFFFV YIHPYVDGNG RMGRFLMNVM LASGGYPWTV IPLETRKDYM 

       490        500 
AALEEASVRK NIVPFSRFLA ELVQKRQ 

« Hide

References

[1]"Genome Sequence of the Deltaproteobacterial Strain NaphS2 and Analysis of Differential Gene Expression during Anaerobic Growth on Naphthalene."
Didonato R.J., Young N.D., Butler J.E., Chin K.J., Hixson K.K., Mouser P., Lipton M.S., Deboy R., Methe B.A.
PLoS ONE 5:E14072-E14072(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: NaphS2 EMBL EFK10026.1.
[2]DeBoy R., Durkin A.S., Methe B., Young N.
Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: NaphS2 EMBL EFK10026.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
ADZZ01000249 Genomic DNA. Translation: EFK10026.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEFK10026; EFK10026; NPH_1834.
PATRIC41129739. VBIDelPro22622_2348.

Family and domain databases

Gene3D1.10.3290.10. 1 hit.
InterProIPR003812. Fido.
[Graphical view]
PfamPF02661. Fic. 1 hit.
[Graphical view]
SUPFAMSSF140931. SSF140931. 1 hit.
PROSITEPS51459. FIDO. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD8F2H3_9DELT
AccessionPrimary (citable) accession number: D8F2H3
Entry history
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: May 29, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)