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Protein
Submitted name:

Toxin-antitoxin system, toxin component, Fic family

Gene

NPH_1834

Organism
delta proteobacterium NaphS2
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Toxin-antitoxin system, toxin component, Fic familyImported
Gene namesi
ORF Names:NPH_1834Imported
Organismidelta proteobacterium NaphS2Imported
Taxonomic identifieri88274 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteria

Family & Domainsi

Family and domain databases

Gene3Di1.10.3290.10. 1 hit.
InterProiIPR003812. Fido.
[Graphical view]
PfamiPF02661. Fic. 1 hit.
[Graphical view]
SUPFAMiSSF140931. SSF140931. 1 hit.
PROSITEiPS51459. FIDO. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D8F2H3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTLQEKVAE SFAVLKKIQD EGIVAIQTKN MTRTHRERLV KSGFIKEVMK
60 70 80 90 100
GWYISARPEE QTGESTAWYA SFWGFCGDYL NSRFGNQWCL SPEQSLRIHG
110 120 130 140 150
ENWSVPNQLP VRTPTGGNKP ISLLHGTSIM DVRLNLPDRK DMEIKENIRI
160 170 180 190 200
MTLPAALISC APAYYSNNTV EARAALSMIS DASGILHKLL EGGHSTVAGR
210 220 230 240 250
LAGAFRNIGK NVIADDIIEA MRTAGYNITE NDPFEEKPVT ISSERELSPH
260 270 280 290 300
VNRIRMYWAD MRGIVLENFP QAPLVRRNTD EYLKYVDEIY PADAYHSLSI
310 320 330 340 350
EGYHVSELLI ERVRSGNWDP ETNRKDKAYA DALAARGYWQ AFQAVKKSLI
360 370 380 390 400
KILNKNSPGT VVSNDHSIWY RELFAPSVSV GLMGASDLAG YRNQPVYIRK
410 420 430 440 450
SRHVPPRCEA LRDLMPAFFS LLENEAEPAV NAVLGHFFFV YIHPYVDGNG
460 470 480 490 500
RMGRFLMNVM LASGGYPWTV IPLETRKDYM AALEEASVRK NIVPFSRFLA

ELVQKRQ
Length:507
Mass (Da):57,312
Last modified:October 5, 2010 - v1
Checksum:iD0CAF7ED831FDD7B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ADZZ01000249 Genomic DNA. Translation: EFK10026.1.
RefSeqiWP_006421374.1. NZ_ADZZ01000249.1.

Genome annotation databases

EnsemblBacteriaiEFK10026; EFK10026; NPH_1834.
PATRICi41129739. VBIDelPro22622_2348.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ADZZ01000249 Genomic DNA. Translation: EFK10026.1.
RefSeqiWP_006421374.1. NZ_ADZZ01000249.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiEFK10026; EFK10026; NPH_1834.
PATRICi41129739. VBIDelPro22622_2348.

Family and domain databases

Gene3Di1.10.3290.10. 1 hit.
InterProiIPR003812. Fido.
[Graphical view]
PfamiPF02661. Fic. 1 hit.
[Graphical view]
SUPFAMiSSF140931. SSF140931. 1 hit.
PROSITEiPS51459. FIDO. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome Sequence of the Deltaproteobacterial Strain NaphS2 and Analysis of Differential Gene Expression during Anaerobic Growth on Naphthalene."
    Didonato R.J., Young N.D., Butler J.E., Chin K.J., Hixson K.K., Mouser P., Lipton M.S., Deboy R., Methe B.A.
    PLoS ONE 5:E14072-E14072(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NaphS2Imported.
  2. DeBoy R., Durkin A.S., Methe B., Young N.
    Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NaphS2Imported.

Entry informationi

Entry nameiD8F2H3_9DELT
AccessioniPrimary (citable) accession number: D8F2H3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 5, 2010
Last sequence update: October 5, 2010
Last modified: October 1, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.