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D7TPJ1

- D7TPJ1_VITVI

UniProt

D7TPJ1 - D7TPJ1_VITVI

Protein

Alpha-amylase

Gene

VIT_03s0063g00450

Organism
Vitis vinifera (Grape)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (10 Aug 2010)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei202 – 2021NucleophileUniRule annotation
    Active sitei227 – 2271Proton donorUniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:VIT_03s0063g00450Imported
    OrganismiVitis vinifera (Grape)Imported
    Taxonomic identifieri29760 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis
    ProteomesiUP000009183: Chromosome 3

    Structurei

    3D structure databases

    ProteinModelPortaliD7TPJ1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    KOiK01176.
    OMAiPDIDHIN.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR012850. A-amylase_bs_C.
    IPR013775. A-amylase_pln.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF07821. Alpha-amyl_C2. 1 hit.
    PF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001028. Alph-amls_plant. 1 hit.
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    SM00810. Alpha-amyl_C2. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D7TPJ1-1 [UniParc]FASTAAdd to Basket

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    MDIATSLSCL LFFITILPAL TASPILFQGF NWESSKKEGG WYNFLINSIP    50
    ELAASGITHV WLPPPSQSVS PEGYMPGRLY DLNASKYGTQ DELKTLIKVF 100
    HSKGVQCIAD IVINHRTAEK QDARGIWAIF EGGTPDDRLD WTPSFICKDD 150
    TPYSDGTGNP DSGDDYSAAP DIDHINPRVQ QELIDWMNWL KIEIGFDGWR 200
    FDFARGFSPA FTKFYMAKTR PKFAVGEIWK SLSYRSDGKP SYNQDSHRRE 250
    LVEWVRGAGG AVNAFDFTTK GILQAAVEGE LWRMKDLNGK PPGMIGLMPG 300
    NAVTFIDNHD TGSTLQHWPF PSDKVMQGYA YILTHPGIPS IFYDHFFEWG 350
    LKEEIMKLII IRSRNRIKPN SAVRILASDS DLYVAAIDGK IIVKIGPRFD 400
    VGNLVPKSFK KIATSGKDYC VWEKK 425
    Length:425
    Mass (Da):47,779
    Last modified:August 10, 2010 - v1
    Checksum:iF9156B3487F485A4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN596006 Genomic DNA. Translation: CBI32414.3.
    RefSeqiXP_002282184.1. XM_002282148.1.

    Genome annotation databases

    EnsemblPlantsiVIT_03s0063g00450.t01; VIT_03s0063g00450.t01; VIT_03s0063g00450.
    GeneIDi100250317.
    KEGGivvi:100250317.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN596006 Genomic DNA. Translation: CBI32414.3 .
    RefSeqi XP_002282184.1. XM_002282148.1.

    3D structure databases

    ProteinModelPortali D7TPJ1.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi VIT_03s0063g00450.t01 ; VIT_03s0063g00450.t01 ; VIT_03s0063g00450 .
    GeneIDi 100250317.
    KEGGi vvi:100250317.

    Phylogenomic databases

    KOi K01176.
    OMAi PDIDHIN.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR012850. A-amylase_bs_C.
    IPR013775. A-amylase_pln.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF07821. Alpha-amyl_C2. 1 hit.
    PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001028. Alph-amls_plant. 1 hit.
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    SM00810. Alpha-amyl_C2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
      The French-Italian Public Consortium for Grapevine Genome Characterization.
      Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.
      , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
      Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Pinot noir / PN40024Imported.

    Entry informationi

    Entry nameiD7TPJ1_VITVI
    AccessioniPrimary (citable) accession number: D7TPJ1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 10, 2010
    Last sequence update: August 10, 2010
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3