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D7TI74

- D7TI74_VITVI

UniProt

D7TI74 - D7TI74_VITVI

Protein

Superoxide dismutase [Cu-Zn]

Gene

VIT_08s0007g07280

Organism
Vitis vinifera (Grape)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    Cofactori

    Binds 1 copper ion per subunit.UniRule annotation
    Binds 1 zinc ion per subunit.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. superoxide dismutase activity Source: UniProtKB-EC

    GO - Biological processi

    1. cellular response to high light intensity Source: EnsemblPlants/Gramene
    2. cellular response to ozone Source: EnsemblPlants/Gramene
    3. cellular response to salt stress Source: EnsemblPlants/Gramene
    4. cellular response to UV-B Source: EnsemblPlants/Gramene

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Keywords - Ligandi

    CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:VIT_08s0007g07280Imported
    OrganismiVitis vinifera (Grape)Imported
    Taxonomic identifieri29760 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis
    ProteomesiUP000009183: Chromosome 8

    Subcellular locationi

    GO - Cellular componenti

    1. vacuole Source: EnsemblPlants/Gramene

    PTM / Processingi

    Proteomic databases

    PRIDEiD7TI74.

    Structurei

    3D structure databases

    ProteinModelPortaliD7TI74.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000263447.
    KOiK04565.
    OMAiEEERHAG.

    Family and domain databases

    Gene3Di2.60.40.200. 1 hit.
    InterProiIPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view]
    PfamiPF00080. Sod_Cu. 1 hit.
    [Graphical view]
    PRINTSiPR00068. CUZNDISMTASE.
    SUPFAMiSSF49329. SSF49329. 1 hit.
    PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
    PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D7TI74-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGSVKAVAVI AGNANVRGSL HFIQDPAGST HVKGRITGLT PGLHGFHIHA    50
    LGDTTNGCMS TGPHFNPLKK DHGAPTDKER HAGDLGNIVA GPDGVAEVSI 100
    KDMQISLSGQ HSILGRAVVV HADPDDLGRG GHELSKTTGN AGGRVGCGII 150
    GLQSSA 156
    Length:156
    Mass (Da):15,787
    Last modified:August 10, 2010 - v1
    Checksum:iA11AD0733B097C8F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN595991 Genomic DNA. Translation: CBI29950.3.
    RefSeqiXP_002281571.1. XM_002281535.2.
    UniGeneiVvi.2574.

    Genome annotation databases

    EnsemblPlantsiVIT_08s0007g07280.t01; VIT_08s0007g07280.t01; VIT_08s0007g07280.
    GeneIDi100260705.
    KEGGivvi:100260705.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN595991 Genomic DNA. Translation: CBI29950.3 .
    RefSeqi XP_002281571.1. XM_002281535.2.
    UniGenei Vvi.2574.

    3D structure databases

    ProteinModelPortali D7TI74.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi D7TI74.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi VIT_08s0007g07280.t01 ; VIT_08s0007g07280.t01 ; VIT_08s0007g07280 .
    GeneIDi 100260705.
    KEGGi vvi:100260705.

    Phylogenomic databases

    HOGENOMi HOG000263447.
    KOi K04565.
    OMAi EEERHAG.

    Family and domain databases

    Gene3Di 2.60.40.200. 1 hit.
    InterProi IPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view ]
    Pfami PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    PRINTSi PR00068. CUZNDISMTASE.
    SUPFAMi SSF49329. SSF49329. 1 hit.
    PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
    PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
      The French-Italian Public Consortium for Grapevine Genome Characterization.
      Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.
      , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
      Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Pinot noir / PN40024Imported.

    Entry informationi

    Entry nameiD7TI74_VITVI
    AccessioniPrimary (citable) accession number: D7TI74
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 10, 2010
    Last sequence update: August 10, 2010
    Last modified: October 1, 2014
    This is version 33 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3