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Protein

Superoxide dismutase [Cu-Zn]

Gene

VIT_08s0007g07280

Organism
Vitis vinifera (Grape)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • Cu cationUniRule annotationNote: Binds 1 copper ion per subunit.UniRule annotation
  • Zn2+UniRule annotationNote: Binds 1 zinc ion per subunit.UniRule annotation

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandCopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:VIT_08s0007g07280Imported
OrganismiVitis vinifera (Grape)Imported
Taxonomic identifieri29760 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis
Proteomesi
  • UP000009183 Componenti: Chromosome 8

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiD7TI74

Interactioni

Protein-protein interaction databases

STRINGi29760.VIT_08s0007g07280.t01

Structurei

3D structure databases

ProteinModelPortaliD7TI74
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini12 – 150Sod_CuInterPro annotationAdd BLAST139

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiKOG0441 Eukaryota
COG2032 LUCA
HOGENOMiHOG000263447
InParanoidiD7TI74
KOiK04565
OMAiGKSVIIH
OrthoDBiEOG09360P4O

Family and domain databases

CDDicd00305 Cu-Zn_Superoxide_Dismutase, 1 hit
Gene3Di2.60.40.200, 1 hit
InterProiView protein in InterPro
IPR036423 SOD-like_Cu/Zn_dom_sf
IPR024134 SOD_Cu/Zn_/chaperone
IPR018152 SOD_Cu/Zn_BS
IPR001424 SOD_Cu_Zn_dom
PANTHERiPTHR10003 PTHR10003, 1 hit
PfamiView protein in Pfam
PF00080 Sod_Cu, 1 hit
PRINTSiPR00068 CUZNDISMTASE
SUPFAMiSSF49329 SSF49329, 1 hit
PROSITEiView protein in PROSITE
PS00087 SOD_CU_ZN_1, 1 hit
PS00332 SOD_CU_ZN_2, 1 hit

Sequencei

Sequence statusi: Complete.

D7TI74-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGSVKAVAVI AGNANVRGSL HFIQDPAGST HVKGRITGLT PGLHGFHIHA
60 70 80 90 100
LGDTTNGCMS TGPHFNPLKK DHGAPTDKER HAGDLGNIVA GPDGVAEVSI
110 120 130 140 150
KDMQISLSGQ HSILGRAVVV HADPDDLGRG GHELSKTTGN AGGRVGCGII

GLQSSA
Length:156
Mass (Da):15,787
Last modified:August 10, 2010 - v1
Checksum:iA11AD0733B097C8F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN595991 Genomic DNA Translation: CBI29950.3
RefSeqiXP_002281571.1, XM_002281535.4
UniGeneiVvi.2574

Genome annotation databases

EnsemblPlantsiVIT_08s0007g07280.t01; VIT_08s0007g07280.t01; VIT_08s0007g07280
GeneIDi100260705
GrameneiVIT_08s0007g07280.t01; VIT_08s0007g07280.t01; VIT_08s0007g07280
KEGGivvi:100260705

Similar proteinsi

Entry informationi

Entry nameiD7TI74_VITVI
AccessioniPrimary (citable) accession number: D7TI74
Entry historyiIntegrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: March 28, 2018
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health