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D7TI74

- D7TI74_VITVI

UniProt

D7TI74 - D7TI74_VITVI

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Protein

Superoxide dismutase [Cu-Zn]

Gene

VIT_08s0007g07280

Organism
Vitis vinifera (Grape)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Binds 1 copper ion per subunit.UniRule annotation
Binds 1 zinc ion per subunit.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:VIT_08s0007g07280Imported
OrganismiVitis vinifera (Grape)Imported
Taxonomic identifieri29760 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis
ProteomesiUP000009183: Chromosome 8

Subcellular locationi

GO - Cellular componenti

  1. peroxisome Source: EnsemblPlants/Gramene
  2. vacuole Source: EnsemblPlants/Gramene
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiD7TI74.

Structurei

3D structure databases

ProteinModelPortaliD7TI74.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000263447.
InParanoidiD7TI74.
KOiK04565.
OMAiEEERHAG.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
PRINTSiPR00068. CUZNDISMTASE.
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D7TI74-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGSVKAVAVI AGNANVRGSL HFIQDPAGST HVKGRITGLT PGLHGFHIHA
60 70 80 90 100
LGDTTNGCMS TGPHFNPLKK DHGAPTDKER HAGDLGNIVA GPDGVAEVSI
110 120 130 140 150
KDMQISLSGQ HSILGRAVVV HADPDDLGRG GHELSKTTGN AGGRVGCGII

GLQSSA
Length:156
Mass (Da):15,787
Last modified:August 10, 2010 - v1
Checksum:iA11AD0733B097C8F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN595991 Genomic DNA. Translation: CBI29950.3.
RefSeqiXP_002281571.1. XM_002281535.2.
UniGeneiVvi.2574.

Genome annotation databases

EnsemblPlantsiVIT_08s0007g07280.t01; VIT_08s0007g07280.t01; VIT_08s0007g07280.
GeneIDi100260705.
KEGGivvi:100260705.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN595991 Genomic DNA. Translation: CBI29950.3 .
RefSeqi XP_002281571.1. XM_002281535.2.
UniGenei Vvi.2574.

3D structure databases

ProteinModelPortali D7TI74.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi D7TI74.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi VIT_08s0007g07280.t01 ; VIT_08s0007g07280.t01 ; VIT_08s0007g07280 .
GeneIDi 100260705.
KEGGi vvi:100260705.

Phylogenomic databases

HOGENOMi HOG000263447.
InParanoidi D7TI74.
KOi K04565.
OMAi EEERHAG.

Family and domain databases

Gene3Di 2.60.40.200. 1 hit.
InterProi IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view ]
Pfami PF00080. Sod_Cu. 1 hit.
[Graphical view ]
PRINTSi PR00068. CUZNDISMTASE.
SUPFAMi SSF49329. SSF49329. 1 hit.
PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
    The French-Italian Public Consortium for Grapevine Genome Characterization.
    Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.
    , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
    Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Pinot noir / PN40024Imported.

Entry informationi

Entry nameiD7TI74_VITVI
AccessioniPrimary (citable) accession number: D7TI74
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: October 29, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3