D7TDS0 (D7TDS0_VITVI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL CBI28643.3

Gene names

Ordered Locus Names:

VIT_04s0043g00400 EMBL CBI28643.3

Organism

Vitis vinifera (Grape) [Reference proteome]

Taxonomic identifier

29760 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › rosids incertae sedis › Vitales › Vitaceae › Vitis

Protein attributes

Sequence length	200 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	exosome (RNase complex) Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D7TDS0 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: 224BDBEB650DC4F8	FASTA	200	21,334
	10 20 30 40 50 60 MQEREEAEEL VTPGEVLGKG SQLKAGRGAY FLPQNGTVYA SLTGRRSLIP PSPLSSDQRP 70 80 90 100 110 120 TVEVTGHSAH GAIPEPGSIV IARVTKVMAR MASADIMCVG PKSVREKFTG IIRQQDVRAT 130 140 150 160 170 180 EIDKVDMHSS FRPGDIVRAL VLSLGDARAY FLSTAKNELG VVSAESAAGA TMVPMSWTEM 190 200 QCPLTGQIEQ RKVAKVGGQA

References

[1]

"The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla." The French-Italian Public Consortium for Grapevine Genome Characterization. Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J. , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P. Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Pinot noir / PN40024.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FN595763 Genomic DNA. Translation: CBI28643.3.
RefSeq	XP_002266663.1. XM_002266627.1.
UniGene	Vvi.2923.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	VIT_04s0043g00400.t01; VIT_04s0043g00400.t01; VIT_04s0043g00400.
GeneID	100263947.
KEGG	vvi:100263947.
Phylogenomic databases
HOGENOM	HOG000177330.
KO	K07573.
OMA	RAYYLST.
Family and domain databases
InterPro	IPR019495. EXOSC1. IPR025721. Exosome_cplx_N_dom. IPR022967. RNA-binding_domain_S1. [Graphical view]
Pfam	PF14382. ECR1_N. 1 hit. PF10447. EXOSC1. 1 hit. [Graphical view]
SMART	SM00316. S1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D7TDS0_VITVI

Accession

Primary (citable) accession number: D7TDS0

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	April 3, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)