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D7TDS0 (D7TDS0_VITVI) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:VIT_04s0043g00400 EMBL CBI28643.3
OrganismVitis vinifera (Grape) [Reference proteome]
Taxonomic identifier29760 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis

Protein attributes

Sequence length200 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentexosome (RNase complex)

Inferred from electronic annotation. Source: InterPro

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D7TDS0 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: 224BDBEB650DC4F8

FASTA20021,334
        10         20         30         40         50         60 
MQEREEAEEL VTPGEVLGKG SQLKAGRGAY FLPQNGTVYA SLTGRRSLIP PSPLSSDQRP 

        70         80         90        100        110        120 
TVEVTGHSAH GAIPEPGSIV IARVTKVMAR MASADIMCVG PKSVREKFTG IIRQQDVRAT 

       130        140        150        160        170        180 
EIDKVDMHSS FRPGDIVRAL VLSLGDARAY FLSTAKNELG VVSAESAAGA TMVPMSWTEM 

       190        200 
QCPLTGQIEQ RKVAKVGGQA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN595763 Genomic DNA. Translation: CBI28643.3.
RefSeqXP_002266663.1. XM_002266627.1.
UniGeneVvi.2923.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsVIT_04s0043g00400.t01; VIT_04s0043g00400.t01; VIT_04s0043g00400.
GeneID100263947.
KEGGvvi:100263947.

Phylogenomic databases

HOGENOMHOG000177330.
KOK07573.
OMACDIISIG.

Family and domain databases

InterProIPR019495. EXOSC1.
IPR025721. Exosome_cplx_N_dom.
IPR012340. NA-bd_OB-fold.
IPR022967. RNA-binding_domain_S1.
[Graphical view]
PfamPF14382. ECR1_N. 1 hit.
PF10447. EXOSC1. 1 hit.
[Graphical view]
SMARTSM00316. S1. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD7TDS0_VITVI
AccessionPrimary (citable) accession number: D7TDS0
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: March 19, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)