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D7TA34

- D7TA34_VITVI

UniProt

D7TA34 - D7TA34_VITVI

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Protein

Glutamate decarboxylase

Gene

VIT_04s0079g00600

Organism
Vitis vinifera (Grape)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

Note: Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:VIT_04s0079g00600Imported
OrganismiVitis vinifera (Grape)Imported
Taxonomic identifieri29760 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis
ProteomesiUP000009183: Chromosome 4

PTM / Processingi

Proteomic databases

PRIDEiD7TA34.

Structurei

3D structure databases

ProteinModelPortaliD7TA34.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000070228.
InParanoidiD7TA34.
KOiK01580.
OMAiIMENCHE.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

D7TA34-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MALSETASES NASIHSTFAS RYVRVSLPRF KIPENSIPKE AAYQIINDEL
60 70 80 90 100
MLDGNPRLNL ASFVTTWMEP ECDKLIMASI NKNYVDMDEY PVTTELQNRC
110 120 130 140 150
VNMIAHLFNA PLGESEAAVG VGTVGSSEAI MLAGLAFKRK WQNKRKAEGK
160 170 180 190 200
PHDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLTDGYYVM DPVKAVEMVD
210 220 230 240 250
ENTICVAAIL GSTLNGEFED VKHLNDLLTK KNKETGWDTP IHVDAASGGF
260 270 280 290 300
IAPFLHPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RSKEDLPDEL
310 320 330 340 350
IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGHEGY RNIMENCQEN
360 370 380 390 400
ARVLKEGLEK TGHFNIVSKE NGVPLVAFSL KDNSCHNEFE VSDMLRRYGW
410 420 430 440 450
IVPAYTMPPD AQHVTVLRVV IREDFSRTLA ERLVTDIQKV LYELDTLPAK
460 470 480
ITAKVQQSNK KSEIETQREI TEAWKKFVRE KKKTNGVC
Length:488
Mass (Da):55,230
Last modified:August 10, 2010 - v1
Checksum:iDE91012B3C78B556
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN595753 Genomic DNA. Translation: CBI27356.3.
RefSeqiXP_002270937.1. XM_002270901.2.
UniGeneiVvi.6995.

Genome annotation databases

EnsemblPlantsiVIT_04s0079g00600.t01; VIT_04s0079g00600.t01; VIT_04s0079g00600.
GeneIDi100256481.
KEGGivvi:100256481.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN595753 Genomic DNA. Translation: CBI27356.3 .
RefSeqi XP_002270937.1. XM_002270901.2.
UniGenei Vvi.6995.

3D structure databases

ProteinModelPortali D7TA34.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi D7TA34.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi VIT_04s0079g00600.t01 ; VIT_04s0079g00600.t01 ; VIT_04s0079g00600 .
GeneIDi 100256481.
KEGGi vvi:100256481.

Phylogenomic databases

HOGENOMi HOG000070228.
InParanoidi D7TA34.
KOi K01580.
OMAi IMENCHE.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
    The French-Italian Public Consortium for Grapevine Genome Characterization.
    Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.
    , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
    Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Pinot noir / PN40024Imported.

Entry informationi

Entry nameiD7TA34_VITVI
AccessioniPrimary (citable) accession number: D7TA34
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: November 26, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3