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D7TA34

- D7TA34_VITVI

UniProt

D7TA34 - D7TA34_VITVI

Protein

Glutamate decarboxylase

Gene

VIT_04s0079g00600

Organism
Vitis vinifera (Grape)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 29 (01 Oct 2014)
      Sequence version 1 (10 Aug 2010)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Ordered Locus Names:VIT_04s0079g00600Imported
    OrganismiVitis vinifera (Grape)Imported
    Taxonomic identifieri29760 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis
    ProteomesiUP000009183: Chromosome 4

    Subcellular locationi

    GO - Cellular componenti

    1. cytosol Source: EnsemblPlants/Gramene
    2. nucleus Source: EnsemblPlants/Gramene

    PTM / Processingi

    Proteomic databases

    PRIDEiD7TA34.

    Structurei

    3D structure databases

    ProteinModelPortaliD7TA34.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000070228.
    KOiK01580.
    OMAiIMENCHE.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D7TA34-1 [UniParc]FASTAAdd to Basket

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    MALSETASES NASIHSTFAS RYVRVSLPRF KIPENSIPKE AAYQIINDEL    50
    MLDGNPRLNL ASFVTTWMEP ECDKLIMASI NKNYVDMDEY PVTTELQNRC 100
    VNMIAHLFNA PLGESEAAVG VGTVGSSEAI MLAGLAFKRK WQNKRKAEGK 150
    PHDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLTDGYYVM DPVKAVEMVD 200
    ENTICVAAIL GSTLNGEFED VKHLNDLLTK KNKETGWDTP IHVDAASGGF 250
    IAPFLHPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RSKEDLPDEL 300
    IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGHEGY RNIMENCQEN 350
    ARVLKEGLEK TGHFNIVSKE NGVPLVAFSL KDNSCHNEFE VSDMLRRYGW 400
    IVPAYTMPPD AQHVTVLRVV IREDFSRTLA ERLVTDIQKV LYELDTLPAK 450
    ITAKVQQSNK KSEIETQREI TEAWKKFVRE KKKTNGVC 488
    Length:488
    Mass (Da):55,230
    Last modified:August 10, 2010 - v1
    Checksum:iDE91012B3C78B556
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN595753 Genomic DNA. Translation: CBI27356.3.
    RefSeqiXP_002270937.1. XM_002270901.2.
    UniGeneiVvi.6995.

    Genome annotation databases

    EnsemblPlantsiVIT_04s0079g00600.t01; VIT_04s0079g00600.t01; VIT_04s0079g00600.
    GeneIDi100256481.
    KEGGivvi:100256481.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN595753 Genomic DNA. Translation: CBI27356.3 .
    RefSeqi XP_002270937.1. XM_002270901.2.
    UniGenei Vvi.6995.

    3D structure databases

    ProteinModelPortali D7TA34.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi D7TA34.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi VIT_04s0079g00600.t01 ; VIT_04s0079g00600.t01 ; VIT_04s0079g00600 .
    GeneIDi 100256481.
    KEGGi vvi:100256481.

    Phylogenomic databases

    HOGENOMi HOG000070228.
    KOi K01580.
    OMAi IMENCHE.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
      The French-Italian Public Consortium for Grapevine Genome Characterization.
      Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.
      , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
      Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Pinot noir / PN40024Imported.

    Entry informationi

    Entry nameiD7TA34_VITVI
    AccessioniPrimary (citable) accession number: D7TA34
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 10, 2010
    Last sequence update: August 10, 2010
    Last modified: October 1, 2014
    This is version 29 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3