Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Putative uncharacterized protein

Gene

VIT_05s0020g02600

Organism
Vitis vinifera (Grape)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Ordered Locus Names:VIT_05s0020g02600Imported
OrganismiVitis vinifera (Grape)Imported
Taxonomic identifieri29760 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis
ProteomesiUP000009183 Componenti: Chromosome 5

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei28 – 4619HelicalSequence analysisAdd
BLAST
Transmembranei75 – 9723HelicalSequence analysisAdd
BLAST
Transmembranei117 – 13721HelicalSequence analysisAdd
BLAST
Transmembranei144 – 16320HelicalSequence analysisAdd
BLAST
Transmembranei175 – 20026HelicalSequence analysisAdd
BLAST
Transmembranei212 – 23120HelicalSequence analysisAdd
BLAST
Transmembranei237 – 25620HelicalSequence analysisAdd
BLAST
Transmembranei277 – 29620HelicalSequence analysisAdd
BLAST
Transmembranei341 – 36121HelicalSequence analysisAdd
BLAST
Transmembranei381 – 40525HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410XP7K. LUCA.
KOG2592. Eukaryota.
HOGENOMiHOG000165463.
InParanoidiD7T6Q6.
OMAiHDYVCNG.

Family and domain databases

InterProiIPR005016. TDE1/TMS.
[Graphical view]
PANTHERiPTHR10383. PTHR10383. 1 hit.
PfamiPF03348. Serinc. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D7T6Q6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSCLASCCAA ATCGLCSSVA SGISKRSARL AYCGLFGGSL IVSWILREVA
60 70 80 90 100
APLLKKIPWI STSQTHSTEW YQQEAVLRVS LGNFLFFAIF ALIMIGVKDQ
110 120 130 140 150
NDRRDSWHHG GWVAKMVIWV LLIILMFFVP NVVISIYGTL SKFGAGLFLL
160 170 180 190 200
VQVIILLDFT HSWNDAWVEK DEQKWYIALL AVSIGCYLLA FTFSGILFIW
210 220 230 240 250
FNPSGNDCGL NIFFIVMTMI LAFSFAVIAL HPRVNGSLLP ASVISLYCAY
260 270 280 290 300
VCYTGLSSEP RDYACNGLHN KSKAVSTSTL ILGMLTTVLS VLYSAVRAGS
310 320 330 340 350
STTFLSPPSS PKSGGKKPLL ESEDTESGKE KKEEEAKPVS YSYTFFHLIF
360 370 380 390 400
ALASMYSAML LSGWTSSNDS SDMIDVGWTS VWVRICTEWV TALLYVWSLL
410
APILFPDREF F
Length:411
Mass (Da):45,430
Last modified:August 10, 2010 - v1
Checksum:i6DB08A54832A071E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN595749 Genomic DNA. Translation: CBI26177.3.
RefSeqiXP_002280143.1. XM_002280107.3.

Genome annotation databases

EnsemblPlantsiVIT_05s0020g02600.t01; VIT_05s0020g02600.t01; VIT_05s0020g02600.
GeneIDi100258051.
KEGGivvi:100258051.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN595749 Genomic DNA. Translation: CBI26177.3.
RefSeqiXP_002280143.1. XM_002280107.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiVIT_05s0020g02600.t01; VIT_05s0020g02600.t01; VIT_05s0020g02600.
GeneIDi100258051.
KEGGivvi:100258051.

Phylogenomic databases

eggNOGiENOG410XP7K. LUCA.
KOG2592. Eukaryota.
HOGENOMiHOG000165463.
InParanoidiD7T6Q6.
OMAiHDYVCNG.

Family and domain databases

InterProiIPR005016. TDE1/TMS.
[Graphical view]
PANTHERiPTHR10383. PTHR10383. 1 hit.
PfamiPF03348. Serinc. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
    The French-Italian Public Consortium for Grapevine Genome Characterization.
    Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.
    , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
    Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Pinot noir / PN40024Imported.

Entry informationi

Entry nameiD7T6Q6_VITVI
AccessioniPrimary (citable) accession number: D7T6Q6
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: December 9, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.