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D7SQB3 (D7SQB3_VITVI) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Ribulose bisphosphate carboxylase small chain RuleBase RU003627

EC=4.1.1.39 RuleBase RU003627
Gene names
Ordered Locus Names:VIT_11s0052g00820 EMBL CBI17844.3
OrganismVitis vinifera (Grape) [Reference proteome]
Taxonomic identifier29760 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis

Protein attributes

Sequence length169 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site By similarity. RuleBase RU003627 SAAS SAAS024681

Catalytic activity

2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O. RuleBase RU003627 SAAS SAAS024681

3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2. RuleBase RU003627 SAAS SAAS024681

Subunit structure

8 large chains + 8 small chains By similarity. RuleBase RU003627 SAAS SAAS024681

Sequence similarities

Belongs to the RuBisCO small chain family. RuleBase RU003627

Ontologies

Keywords
   Biological processCarbon dioxide fixation RuleBase RU003627 SAAS SAAS024681
Photorespiration RuleBase RU003627
Photosynthesis RuleBase RU003627 SAAS SAAS024681
   Cellular componentPlastid RuleBase RU003627
   Molecular functionLyase RuleBase RU003627 SAAS SAAS024681
Monooxygenase RuleBase RU003627 SAAS SAAS024681
Oxidoreductase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: UniProtKB-KW

photorespiration

Inferred from electronic annotation. Source: UniProtKB-KW

photosynthesis

Inferred from electronic annotation. Source: UniProtKB-KW

response to blue light

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

response to far red light

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

response to red light

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Cellular_componentapoplast

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

chloroplast envelope

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

chloroplast stroma

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

cytosolic ribosome

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

membrane

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

thylakoid

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionmonooxygenase activity

Inferred from electronic annotation. Source: UniProtKB-KW

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D7SQB3 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: 270C770608FE77A7

FASTA16919,273
        10         20         30         40         50         60 
MAAGILSGPV TSFGYVGLKP HQPKLFPAKD SVAWSRKTVS NGSKTHCMKT WNPINNKKFE 

        70         80         90        100        110        120 
TLSYLPPLSD DSIAKEIDYM LKKGWIPCLE FDEVGYVFRK NSQIPGYYDG RYWTLWKLPM 

       130        140        150        160 
FGCNDASQVL NEIHECKKTY PNAYIRCLAF DNEHQGQCMA FVIQKPTCS 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN594964 Genomic DNA. Translation: CBI17844.3.
RefSeqXP_002270117.1. XM_002270081.1.
UniGeneVvi.3492.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsVIT_11s0052g00820.t01; VIT_11s0052g00820.t01; VIT_11s0052g00820.
GeneID100256536.
KEGGvvi:100256536.

Phylogenomic databases

HOGENOMHOG000141332.
KOK01602.
OMANEIHECK.

Family and domain databases

Gene3D3.30.190.10. 1 hit.
InterProIPR024681. RuBisCO_sc.
IPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamPF00101. RuBisCO_small. 1 hit.
[Graphical view]
PRINTSPR00152. RUBISCOSMALL.
SUPFAMSSF55239. SSF55239. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD7SQB3_VITVI
AccessionPrimary (citable) accession number: D7SQB3
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: March 19, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)