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D7SPF1

- D7SPF1_VITVI

UniProt

D7SPF1 - D7SPF1_VITVI

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Protein
Submitted name:

Putative uncharacterized protein

Gene

VIT_04s0023g01650

Organism
Vitis vinifera (Grape)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: EnsemblPlants/Gramene
  2. cobalt ion binding Source: EnsemblPlants/Gramene
  3. flavin adenine dinucleotide binding Source: EnsemblPlants/Gramene
  4. succinate dehydrogenase (ubiquinone) activity Source: EnsemblPlants/Gramene

GO - Biological processi

  1. mitochondrial electron transport, succinate to ubiquinone Source: EnsemblPlants/Gramene
  2. tricarboxylic acid cycle Source: EnsemblPlants/Gramene
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Ordered Locus Names:VIT_04s0023g01650Imported
OrganismiVitis vinifera (Grape)Imported
Taxonomic identifieri29760 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis
ProteomesiUP000009183: Chromosome 4

Subcellular locationi

GO - Cellular componenti

  1. cell wall Source: EnsemblPlants/Gramene
  2. mitochondrial respiratory chain complex II Source: EnsemblPlants/Gramene
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiD7SPF1.

Structurei

3D structure databases

ProteinModelPortaliD7SPF1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000160475.
InParanoidiD7SPF1.
KOiK00234.
OMAiRTEQGRI.

Family and domain databases

Gene3Di1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProiIPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view]
SUPFAMiSSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsiTIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEiPS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D7SPF1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MWRCVSRGLR FRSSDSKRSL TSEYLKPHIS RFFSTESTGG GSSGTSEAEI
60 70 80 90 100
KAAIGELSKH GVDTAGITEL YRSSYTSSYT IVDHTYDAVV VGAGGAGLRA
110 120 130 140 150
AIGLSEHGFN TACITKLFPT RSHTVAAQGG INAALGNMTE DDWRWHMYDT
160 170 180 190 200
VKGSDWLGDQ DAIQYMCREA PKAVIELENY GLPFSRTEDG RIYQRAFGGQ
210 220 230 240 250
SLNFGKGGQA YRCACAADRT GHALLHTLYG QAMKHNTQFF VEYFALDLLM
260 270 280 290 300
DNDGACQGVI ALNMEDGTLH RFQAASTILA TGGYGRTYFS ATSAHTCTGD
310 320 330 340 350
GNAMVARAGL PLQDLEFVQF HPTGIYGAGC LITEGSRGEG GILRNSEGER
360 370 380 390 400
FMERYAPTAK DLASRDVVSR SMTMEIREGR GVGPLKDHIY LHLNHLPPEV
410 420 430 440 450
LKERLPGISE TAAIFAGVDV TKEPIPVLPT VHYNMGGIPT NYHGEVLTIK
460 470 480 490 500
GNDPDAVVPG LMAAGEAACA SVHGANRLGA NSLLDIVVFG RACANRVAEI
510 520 530 540 550
HKPGEKQKPL EKDSGEKTIA WLDKLRNSNG SIPTSKIRLN MQRVMQNNAA
560 570 580 590 600
VFRTQETLEE GCKLIDKAWE SFHDVQLKDR SLIWNSDLSE TIELENLLIN
610 620 630 640 650
ACITMHSAEA RKESRGAHAR EDFTKRDDEN WIRHTLGYWE NEKVRLDYRP
660 670
VHMNPLDDEI ESIPPKARVY
Length:670
Mass (Da):73,659
Last modified:August 10, 2010 - v1
Checksum:i8D6402C3882CA272
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN594959 Genomic DNA. Translation: CBI17530.3.
RefSeqiXP_002269407.1. XM_002269371.2.
UniGeneiVvi.12221.

Genome annotation databases

EnsemblPlantsiVIT_04s0023g01650.t01; VIT_04s0023g01650.t01; VIT_04s0023g01650.
GeneIDi100254718.
KEGGivvi:100254718.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN594959 Genomic DNA. Translation: CBI17530.3 .
RefSeqi XP_002269407.1. XM_002269371.2.
UniGenei Vvi.12221.

3D structure databases

ProteinModelPortali D7SPF1.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi D7SPF1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi VIT_04s0023g01650.t01 ; VIT_04s0023g01650.t01 ; VIT_04s0023g01650 .
GeneIDi 100254718.
KEGGi vvi:100254718.

Phylogenomic databases

HOGENOMi HOG000160475.
InParanoidi D7SPF1.
KOi K00234.
OMAi RTEQGRI.

Family and domain databases

Gene3Di 1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProi IPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view ]
Pfami PF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view ]
SUPFAMi SSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsi TIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEi PS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
    The French-Italian Public Consortium for Grapevine Genome Characterization.
    Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.
    , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
    Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Pinot noir / PN40024Imported.

Entry informationi

Entry nameiD7SPF1_VITVI
AccessioniPrimary (citable) accession number: D7SPF1
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: October 29, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3