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Protein
Submitted name:

Uncharacterized protein

Gene

ARALYDRAFT_332974

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:ARALYDRAFT_332974Imported
OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
Taxonomic identifieri81972 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000008694 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

ChromosomeSAAS annotation, NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi59689.fgenesh1_pm.C_scaffold_9000002.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini205 – 352YDGInterPro annotationAdd BLAST148
Domaini432 – 490Pre-SETInterPro annotationAdd BLAST59
Domaini493 – 637SETInterPro annotationAdd BLAST145

Phylogenomic databases

KOiK11420.
OrthoDBiEOG093603OW.

Family and domain databases

Gene3Di2.30.280.10. 1 hit.
InterProiView protein in InterPro
IPR025794. Hist-Lys_N-MeTrfase_plant.
IPR007728. Pre-SET_dom.
IPR015947. PUA-like_sf.
IPR001214. SET_dom.
IPR036987. SRA-YDG_sf.
IPR003105. SRA_YDG.
PfamiView protein in Pfam
PF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
SMARTiView protein in SMART
SM00468. PreSET. 1 hit.
SM00317. SET. 1 hit.
SM00466. SRA. 1 hit.
SUPFAMiSSF88697. SSF88697. 1 hit.
PROSITEiView protein in PROSITE
PS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.

Sequencei

Sequence statusi: Complete.

D7MV64-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGSSHIPLDP SLNPSPSLIP KLEPVTESTQ NLSFQLPNTN PQALISSPIS
60 70 80 90 100
NFNEATNFSS DYITVAETFR SAFAQRLKRH DDVTVLDSLT GAIVPVEENP
110 120 130 140 150
DPEPIPVSYS TNDASPSVVV TRRPKPQQRS SELVRITDVG PEGERQFREH
160 170 180 190 200
VRKTRMIYDS LRMFLMMEEV KLNGFGGRKG RPDSKAASMM KDCMLWLNRD
210 220 230 240 250
KRIVGSIPGV QVGDIFFFRL ELCVMGLHGQ TQAGIDYLTG SLSSNGEPIA
260 270 280 290 300
TSVIVSGGYE DDDDQGDVIM YTGHGGQDKL GRQAEHQKLE GGNLAMERSM
310 320 330 340 350
YYGIEVRVIR GLKYENSVSS KVYVYDGLFR IVDSWFDVGK SGFGVFKYRL
360 370 380 390 400
ERIEGQAEMG SSILKLARTL KTNPLSVRPR GYISSDISNR KENVPVYLFN
410 420 430 440 450
DIDNDQEPLY YEYLATTSFP PGLFVQRSDS ASGCDCIKGC GSGCLCEAKN
460 470 480 490 500
SGEFAYDYHG KLIRQKPLIH ECGAACRCPP SCRNRVTQKG LRNRLEVFRS
510 520 530 540 550
LETGWGVRSL DILHAGAFIC EYAGVALTRE QANILTMNGD TLVYPARFSS
560 570 580 590 600
ARWEAWGDLS QVLADFERPS YPEIPPVDFA MDVSKMRNVA CYISHSTDPN
610 620 630 640 650
VIVQLVLHDH NSLMFPRVML FAAENIPPMT ELSLDYGVAD DWTAKLAICN
Length:650
Mass (Da):72,345
Last modified:August 10, 2010 - v1
Checksum:iCA27CD2F3AAB40A9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL348721 Genomic DNA. Translation: EFH39386.1.
RefSeqiXP_002863127.1. XM_002863081.1.

Genome annotation databases

EnsemblPlantsifgenesh1_pm.C_scaffold_9000002; fgenesh1_pm.C_scaffold_9000002; fgenesh1_pm.C_scaffold_9000002.
GeneIDi9299204.
Grameneifgenesh1_pm.C_scaffold_9000002; fgenesh1_pm.C_scaffold_9000002; fgenesh1_pm.C_scaffold_9000002.
KEGGialy:ARALYDRAFT_332974.

Similar proteinsi

Entry informationi

Entry nameiD7MV64_ARALL
AccessioniPrimary (citable) accession number: D7MV64
Entry historyiIntegrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: November 22, 2017
This is version 51 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported