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Protein
Submitted name:

Uncharacterized protein

Gene

ARALYDRAFT_496112

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:ARALYDRAFT_496112Imported
OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
Taxonomic identifieri81972 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000008694 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi59689.fgenesh2_kg.8__1928__AT5G59780.3

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 57HTH myb-typeInterPro annotationAdd BLAST53
Domaini58 – 112HTH myb-typeInterPro annotationAdd BLAST55

Phylogenomic databases

KOiK09422
OrthoDBiEOG09360PCP

Family and domain databases

CDDicd00167 SANT, 2 hits
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR017930 Myb_dom
IPR001005 SANT/Myb
PfamiView protein in Pfam
PF00249 Myb_DNA-binding, 2 hits
SMARTiView protein in SMART
SM00717 SANT, 2 hits
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS51294 HTH_MYB, 2 hits

Sequencei

Sequence statusi: Complete.

D7MSI4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLVQEEYRK GPWTEQEDIL LVNFVHLFGD RRWDFVAKVS GLNRTGKSCR
60 70 80 90 100
LRWVNYLHPG LKRGKMTPQE ERLVLELHAK WGNRWSKIAR KLPGRTDNEI
110 120 130 140 150
KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTTQD TGGSNGKMNQ
160 170 180 190 200
ECEDGYYSMD DIWREIDQSG ANVIKPVKDI YYSEQSCYLN FPPLASPTWE
210 220 230
SSLESIWNMD TDESKMSSFA IDQFPLSFEH GRSSWSSL
Length:238
Mass (Da):27,670
Last modified:August 10, 2010 - v1
Checksum:i468A0D29DF3F619D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL348720 Genomic DNA Translation: EFH42608.1
RefSeqiXP_002866349.1, XM_002866303.1

Genome annotation databases

EnsemblPlantsifgenesh2_kg.8__1928__AT5G59780.3; fgenesh2_kg.8__1928__AT5G59780.3; fgenesh2_kg.8__1928__AT5G59780.3
Grameneifgenesh2_kg.8__1928__AT5G59780.3; fgenesh2_kg.8__1928__AT5G59780.3; fgenesh2_kg.8__1928__AT5G59780.3
KEGGialy:ARALYDRAFT_496112

Similar proteinsi

Entry informationi

Entry nameiD7MSI4_ARALL
AccessioniPrimary (citable) accession number: D7MSI4
Entry historyiIntegrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: November 22, 2017
This is version 49 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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