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Protein

Ribulose bisphosphate carboxylase small chain

Gene

ARALYDRAFT_494136

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.UniRule annotation

Catalytic activityi

2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O.UniRule annotationSAAS annotation
3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyaseUniRule annotationSAAS annotation, MonooxygenaseUniRule annotationSAAS annotation, Oxidoreductase
Biological processCarbon dioxide fixationUniRule annotationSAAS annotation, PhotorespirationUniRule annotationSAAS annotation, PhotosynthesisUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Ribulose bisphosphate carboxylase small chainUniRule annotation (EC:4.1.1.39UniRule annotation)
Gene namesi
ORF Names:ARALYDRAFT_494136Imported
OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
Taxonomic identifieri81972 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000008694 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

ChloroplastSAAS annotation, Plastid

Interactioni

Subunit structurei

8 large chains + 8 small chains.UniRule annotationSAAS annotation

Protein-protein interaction databases

STRINGi59689.fgenesh2_kg.7__3569__AT5G38430.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini66 – 175RuBisCO_smallInterPro annotationAdd BLAST110

Sequence similaritiesi

Belongs to the RuBisCO small chain family.UniRule annotationSAAS annotation

Phylogenomic databases

KOiK01602.
OrthoDBiEOG09360OM1.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiView protein in InterPro
IPR024681. RuBisCO_sc.
IPR000894. RuBisCO_sc_dom.
IPR024680. RuBisCO_ssu_N.
IPR036385. RuBisCO_ssu_sf.
PfamiView protein in Pfam
PF12338. RbcS. 1 hit.
PF00101. RuBisCO_small. 1 hit.
PRINTSiPR00152. RUBISCOSMALL.
SMARTiView protein in SMART
SM00961. RuBisCO_small. 1 hit.
SUPFAMiSSF55239. SSF55239. 1 hit.

Sequencei

Sequence statusi: Complete.

D7MJY9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASSMLSSAA VVTSPAQATM VAPFTGLKSS ATFPVTRKAN NDITSISSNG
60 70 80 90 100
GRVSCMKVWP PIGKKKFETL SYLPDLTDVE LAKEVDYLLR NKWIPCVEFE
110 120 130 140 150
LEHGFVYREH GNTPGYYDGR YWTMWKLPLF GCTDSAQVLK EVQECKKEYP
160 170 180
NAFIRIIGFD NNRQVQCISF IAYKPPSFTD A
Length:181
Mass (Da):20,355
Last modified:August 10, 2010 - v1
Checksum:i1F4DE3AD3F2ED1AE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL348719 Genomic DNA. Translation: EFH45034.1.
RefSeqiXP_002868775.1. XM_002868729.1.

Genome annotation databases

EnsemblPlantsifgenesh2_kg.7__3569__AT5G38430.1; fgenesh2_kg.7__3569__AT5G38430.1; fgenesh2_kg.7__3569__AT5G38430.1.
Grameneifgenesh2_kg.7__3569__AT5G38430.1; fgenesh2_kg.7__3569__AT5G38430.1; fgenesh2_kg.7__3569__AT5G38430.1.
KEGGialy:ARALYDRAFT_494136.

Similar proteinsi

Entry informationi

Entry nameiD7MJY9_ARALL
AccessioniPrimary (citable) accession number: D7MJY9
Entry historyiIntegrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: October 25, 2017
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported