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Protein
Submitted name:

Putative uncharacterized protein

Gene

ARALYDRAFT_494099

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:ARALYDRAFT_494099Imported
OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
Taxonomic identifieri81972 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000008694 Componenti: Unassembled WGS sequence

Family & Domainsi

Phylogenomic databases

KOiK00318.

Family and domain databases

Gene3Di3.20.20.220. 2 hits.
InterProiIPR029041. FAD-linked_oxidoreductase-like.
IPR002872. Proline_DH_dom.
IPR015659. Proline_oxidase.
[Graphical view]
PANTHERiPTHR13914. PTHR13914. 1 hit.
PfamiPF01619. Pro_dh. 1 hit.
[Graphical view]
SUPFAMiSSF51730. SSF51730. 2 hits.

Sequencei

Sequence statusi: Complete.

D7MJV9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANRFLRPNL IHRFSTVSPV GPPTTVIPEI LSFDQPKQDV DLDLSDQARL
60 70 80 90 100
FASVPISTLL RSTAVLHATS IGPMVDLGSW LMSSKLMDTT VTRDLILRVV
110 120 130 140 150
KGTFYDHFCA GEDAAAAARR VSSMYESTGL KGMLVYGVEH AEDSGACDEN
160 170 180 190 200
IQKFIETVEA AKTLPTSHLS SVVIKITAIC PMNLLKRVSD LLRWQYKNPN
210 220 230 240 250
FKLPWKLNSF PVFSGLSPLY HTTSEPEPLT AEEERELEKA HERLKSVCKR
260 270 280 290 300
CQESNVPLLI DAEDTILQPA IDYMAYWSAI MFNSDKDRPI VYNTIQAYLK
310 320 330 340 350
DAGERLHLSL RESEKMNVPI GFKLVRGAYM SSEARLADSL GHKSPVHDTI
360 370 380 390 400
QDTHNCYNDC MSFLMEKASN GSGIAVILAT HNTDSGKLGA RKASELGIDK
410 420 430 440 450
ENGKIEFAQL YGMSDALSFG LKRAGFNVSK YMPYGPVDTA VPYLIRRAYE
460 470
NRGMMSTGAL DRQLMRKELK RRVMGW
Length:476
Mass (Da):53,145
Last modified:August 10, 2010 - v1
Checksum:i6A53CD1B46C40CBC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL348719 Genomic DNA. Translation: EFH47088.1.
RefSeqiXP_002870829.1. XM_002870783.1.

Genome annotation databases

EnsemblPlantsifgenesh2_kg.7__3532__AT5G38710.1; fgenesh2_kg.7__3532__AT5G38710.1; fgenesh2_kg.7__3532__AT5G38710.1.
GeneIDi9304830.
KEGGialy:ARALYDRAFT_494099.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL348719 Genomic DNA. Translation: EFH47088.1.
RefSeqiXP_002870829.1. XM_002870783.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsifgenesh2_kg.7__3532__AT5G38710.1; fgenesh2_kg.7__3532__AT5G38710.1; fgenesh2_kg.7__3532__AT5G38710.1.
GeneIDi9304830.
KEGGialy:ARALYDRAFT_494099.

Phylogenomic databases

KOiK00318.

Family and domain databases

Gene3Di3.20.20.220. 2 hits.
InterProiIPR029041. FAD-linked_oxidoreductase-like.
IPR002872. Proline_DH_dom.
IPR015659. Proline_oxidase.
[Graphical view]
PANTHERiPTHR13914. PTHR13914. 1 hit.
PfamiPF01619. Pro_dh. 1 hit.
[Graphical view]
SUPFAMiSSF51730. SSF51730. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. MN47Imported.

Entry informationi

Entry nameiD7MJV9_ARALL
AccessioniPrimary (citable) accession number: D7MJV9
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: May 27, 2015
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.