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Protein

Glycerol-3-phosphate dehydrogenase [NAD(+)]

Gene

ARALYDRAFT_493921

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

sn-glycerol 3-phosphate + NAD+ = glycerone phosphate + NADH.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei58NADUniRule annotation1
Binding sitei115NADUniRule annotation1
Binding sitei138SubstrateUniRule annotation1
Binding sitei171NAD; via amide nitrogenUniRule annotation1
Active sitei223Proton acceptorUniRule annotation1
Binding sitei287NADUniRule annotation1
Binding sitei316NAD; via amide nitrogenUniRule annotation1
Binding sitei318NADUniRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi27 – 32NADUniRule annotation6

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandNADUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glycerol-3-phosphate dehydrogenase [NAD(+)]UniRule annotation (EC:1.1.1.8UniRule annotation)
Gene namesi
ORF Names:ARALYDRAFT_493921Imported
OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
Taxonomic identifieri81972 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000008694 Componenti: Unassembled WGS sequence

Subcellular locationi

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi59689.fgenesh2_kg.7__3354__AT5G40610.1

Structurei

3D structure databases

ProteinModelPortaliD7MJ57
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini22 – 187NAD_Gly3P_dh_NInterPro annotationAdd BLAST166
Domaini212 – 359NAD_Gly3P_dh_CInterPro annotationAdd BLAST148

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni287 – 288Substrate bindingUniRule annotation2

Sequence similaritiesi

Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.UniRule annotation

Phylogenomic databases

KOiK00006
OrthoDBiEOG09360DM6

Family and domain databases

Gene3Di1.10.1040.10, 1 hit
InterProiView protein in InterPro
IPR008927 6-PGluconate_DH-like_C_sf
IPR013328 6PGD_dom2
IPR006168 G3P_DH_NAD-dep
IPR006109 G3P_DH_NAD-dep_C
IPR017751 G3P_DH_NAD-dep_euk
IPR011128 G3P_DH_NAD-dep_N
IPR036291 NAD(P)-bd_dom_sf
PfamiView protein in Pfam
PF07479 NAD_Gly3P_dh_C, 1 hit
PF01210 NAD_Gly3P_dh_N, 1 hit
PIRSFiPIRSF000114 Glycerol-3-P_dh, 1 hit
PRINTSiPR00077 GPDHDRGNASE
SUPFAMiSSF48179 SSF48179, 1 hit
SSF51735 SSF51735, 1 hit
TIGRFAMsiTIGR03376 glycerol3P_DH, 1 hit
PROSITEiView protein in PROSITE
PS00957 NAD_G3PDH, 1 hit

Sequencei

Sequence statusi: Complete.

D7MJ57-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPALEKSRQ GNGECNEVSK SKVTVVGSGN WGSVAAKLIA SNALKLPSFH
60 70 80 90 100
DEVRMWVFEE VLPNGEKLTD VINKTNENVK YLPGVKLGRN VVADPDLENA
110 120 130 140 150
VKEANMLVFV TPHQFMDGIC KKLDGKITGD VEAISLVKGM EVKKEGPCMI
160 170 180 190 200
SSLISKQLGI NCCVLMGANI ANEIAVEKFS EATVGYRGSR EIADTWVQLF
210 220 230 240 250
STPYFMVTPV HDVEGVELCG TLKNVVAIAA GFVDGLEMGN NTKAAIMRIG
260 270 280 290 300
LREMKALSKL LFPSVKDSTF FESCGVADVI TTCLGGRNRR VAEAFAKSGG
310 320 330 340 350
KRSFDELEAE MLQGQKLQGV STAREVYEVL NHCGWLEMFP LFSTVHQICT
360
GHLQPEAIVQ YRENKL
Length:366
Mass (Da):39,942
Last modified:August 10, 2010 - v1
Checksum:i41D1E8DD47072ECC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL348719 Genomic DNA Translation: EFH44903.1
RefSeqiXP_002868644.1, XM_002868598.1

Genome annotation databases

EnsemblPlantsifgenesh2_kg.7__3354__AT5G40610.1; fgenesh2_kg.7__3354__AT5G40610.1; fgenesh2_kg.7__3354__AT5G40610.1
GeneIDi9306762
Grameneifgenesh2_kg.7__3354__AT5G40610.1; fgenesh2_kg.7__3354__AT5G40610.1; fgenesh2_kg.7__3354__AT5G40610.1
KEGGialy:ARALYDRAFT_493921

Similar proteinsi

Entry informationi

Entry nameiD7MJ57_ARALL
AccessioniPrimary (citable) accession number: D7MJ57
Entry historyiIntegrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: May 23, 2018
This is version 52 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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