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D7MJ52

- D7MJ52_ARALL

UniProt

D7MJ52 - D7MJ52_ARALL

Protein
Submitted name:

Succinate dehydrogenase 2-2

Gene

SDH2-2

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (10 Aug 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. 2 iron, 2 sulfur cluster binding Source: InterPro
    2. electron carrier activity Source: InterPro
    3. oxidoreductase activity Source: InterPro
    4. zinc ion binding Source: EnsemblPlants/Gramene

    GO - Biological processi

    1. tricarboxylic acid cycle Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Succinate dehydrogenase 2-2Imported
    Gene namesi
    Name:SDH2-2Imported
    ORF Names:ARALYDRAFT_493917Imported
    OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
    Taxonomic identifieri81972 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000008694: Unassembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. mitochondrial respiratory chain complex II Source: EnsemblPlants/Gramene

    Family & Domainsi

    Phylogenomic databases

    KOiK00235.

    Family and domain databases

    Gene3Di3.10.20.30. 1 hit.
    InterProiIPR001041. 2Fe-2S_ferredoxin-type.
    IPR006058. 2Fe2S_fd_BS.
    IPR017896. 4Fe4S_Fe-S-bd.
    IPR017900. 4Fe4S_Fe_S_CS.
    IPR012675. Beta-grasp_dom.
    IPR009051. Helical_ferredxn.
    IPR004489. Succ_DH/fum_Rdtase_Fe-S.
    IPR025192. Succ_DH/fum_Rdtase_N.
    [Graphical view]
    PfamiPF13085. Fer2_3. 1 hit.
    [Graphical view]
    SUPFAMiSSF46548. SSF46548. 1 hit.
    SSF54292. SSF54292. 1 hit.
    TIGRFAMsiTIGR00384. dhsB. 1 hit.
    PROSITEiPS00197. 2FE2S_FER_1. 1 hit.
    PS51085. 2FE2S_FER_2. 1 hit.
    PS00198. 4FE4S_FER_1. 1 hit.
    PS51379. 4FE4S_FER_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D7MJ52-1 [UniParc]FASTAAdd to Basket

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    MTFGLIGRVV GTKSSRLYTA ARLIPARWTS TGSEAQSKAS TGGGGASLKT    50
    FQIYRWNPDN PGKPELQDYQ IDLKDCGPMV LDALIKIKNE MDPSLTFRRS 100
    CREGICGSCA MNIDGCNGLA CLTKIESGSK ETTITPLPHM FVIKDLVVDM 150
    TNFYNQYKSI EPWLKRKNPA SVPGKEILQS KKDRAKLDGM YECILCACCS 200
    TSCPSYWWNP ESYLGPAALL HANRWISDSR DEYTKERLEA IDDEFKLYRC 250
    HTILNCARAC PKGLNPGKQI THIKQLQKSG 280
    Length:280
    Mass (Da):31,247
    Last modified:August 10, 2010 - v1
    Checksum:i1000FC758818AF26
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL348719 Genomic DNA. Translation: EFH46947.1.
    RefSeqiXP_002870688.1. XM_002870642.1.

    Genome annotation databases

    EnsemblPlantsifgenesh2_kg.7__3350__AT5G40650.1; fgenesh2_kg.7__3350__AT5G40650.1; fgenesh2_kg.7__3350__AT5G40650.1.
    GeneIDi9304714.
    KEGGialy:ARALYDRAFT_493917.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL348719 Genomic DNA. Translation: EFH46947.1 .
    RefSeqi XP_002870688.1. XM_002870642.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi fgenesh2_kg.7__3350__AT5G40650.1 ; fgenesh2_kg.7__3350__AT5G40650.1 ; fgenesh2_kg.7__3350__AT5G40650.1 .
    GeneIDi 9304714.
    KEGGi aly:ARALYDRAFT_493917.

    Phylogenomic databases

    KOi K00235.

    Family and domain databases

    Gene3Di 3.10.20.30. 1 hit.
    InterProi IPR001041. 2Fe-2S_ferredoxin-type.
    IPR006058. 2Fe2S_fd_BS.
    IPR017896. 4Fe4S_Fe-S-bd.
    IPR017900. 4Fe4S_Fe_S_CS.
    IPR012675. Beta-grasp_dom.
    IPR009051. Helical_ferredxn.
    IPR004489. Succ_DH/fum_Rdtase_Fe-S.
    IPR025192. Succ_DH/fum_Rdtase_N.
    [Graphical view ]
    Pfami PF13085. Fer2_3. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46548. SSF46548. 1 hit.
    SSF54292. SSF54292. 1 hit.
    TIGRFAMsi TIGR00384. dhsB. 1 hit.
    PROSITEi PS00197. 2FE2S_FER_1. 1 hit.
    PS51085. 2FE2S_FER_2. 1 hit.
    PS00198. 4FE4S_FER_1. 1 hit.
    PS51379. 4FE4S_FER_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. MN47Imported.

    Entry informationi

    Entry nameiD7MJ52_ARALL
    AccessioniPrimary (citable) accession number: D7MJ52
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 10, 2010
    Last sequence update: August 10, 2010
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3