D7MBP3 (D7MBP3_ARALL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
60S ribosomal protein L8 EMBL EFH45302.1

Gene names

ORF Names:

ARALYDRAFT_491018 EMBL EFH45302.1

Organism

Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress) [Complete proteome]

Taxonomic identifier

81972 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis › Arabidopsis lyrata

Protein attributes

Sequence length	258 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein EMBL EFH45302.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D7MBP3 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: FB64ABFA26FA95AD	FASTA	258	27,934
	10 20 30 40 50 60 MGRVIRAQRK GAGSVFKSHT HHRKGPAKFR SLDFGERNGY LKGVVTEIIH DPGRGAPLAR 70 80 90 100 110 120 VAFRHPFRFK KQKELFVAAE GMYTGQFLYC GKKATLVVGN VLPLRSIPEG AVVCNVEHHV 130 140 150 160 170 180 GDRGVFARAS GDYAIVIAHN PDNDTSRIKL PSGSKKIVPS GCRAMIGQVA GGGRTEKPML 190 200 210 220 230 240 KAGNAYHKYR VKRNCWPKVR GVAMNPVEHP HGGGNHQHIG HASTVRRDAP PGQKVGLIAA 250 RRTGRLRGQA AALASKAD

References

[1]

"The Arabidopsis lyrata genome sequence and the basis of rapid genome size change." Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M., Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G., Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K., Spannagl M., Wang X. , Yang L., Nasrallah M.E., Bergelson J., Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y., Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L. Nat. Genet. 43:476-481(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. MN47.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GL348719 Genomic DNA. Translation: EFH45302.1.
RefSeq	XP_002869043.1. XM_002868997.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	9303106.
KEGG	aly:ARALYDRAFT_491018.
Phylogenomic databases
KO	K02938.
Family and domain databases
Gene3D	2.30.30.30. 1 hit. 2.40.50.140. 1 hit. 4.10.950.10. 1 hit.
HAMAP	MF_01320_A. Ribosomal_L2_A.
InterPro	IPR012340. NA-bd_OB-fold. IPR022666. Rbsml_prot_L2_RNA-bd_dom. IPR014722. Rib_L2_dom2. IPR002171. Ribosomal_L2. IPR023672. Ribosomal_L2_arc. IPR022669. Ribosomal_L2_C. IPR022671. Ribosomal_L2_CS. IPR014726. Ribosomal_L2_dom3. IPR008991. Translation_prot_SH3-like. [Graphical view]
PANTHER	PTHR13691. PTHR13691. 1 hit.
Pfam	PF00181. Ribosomal_L2. 1 hit. PF03947. Ribosomal_L2_C. 1 hit. [Graphical view]
PIRSF	PIRSF002158. Ribosomal_L2. 1 hit.
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit. SSF50104. Transl_SH3_like. 1 hit.
PROSITE	PS00467. RIBOSOMAL_L2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D7MBP3_ARALL

Accession

Primary (citable) accession number: D7MBP3

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	March 6, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)