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D7M4N5

- D7M4N5_ARALL

UniProt

D7M4N5 - D7M4N5_ARALL

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Protein
Submitted name:

Putative uncharacterized protein

Gene

ARALYDRAFT_489451

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. NAD-dependent histone deacetylase activity (H3-K14 specific) Source: EnsemblPlants/Gramene
  2. NAD-dependent histone deacetylase activity (H3-K18 specific) Source: EnsemblPlants/Gramene
  3. NAD-dependent histone deacetylase activity (H3-K9 specific) Source: EnsemblPlants/Gramene
  4. NAD-dependent histone deacetylase activity (H4-K16 specific) Source: EnsemblPlants/Gramene

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: EnsemblPlants/Gramene
  2. transcription, DNA-templated Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:ARALYDRAFT_489451Imported
OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
Taxonomic identifieri81972 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000008694: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: EnsemblPlants/Gramene
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliD7M4N5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK11418.

Family and domain databases

Gene3Di3.40.800.20. 1 hit.
InterProiIPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 1 hit.
PfamiPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PRINTSiPR01270. HDASUPER.

Sequencei

Sequence statusi: Complete.

D7M4N5 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTDTRVISTW TELTRDSAIY LLFTFFAIKV YIFLFCCTRT SEMSSFSMAT
60 70 80 90 100
HPEALRRERI LNSKLYFDVP LSKVSIIYSS AYDISFMGIE KLHPFDSSKW
110 120 130 140 150
GRVCKFLVSD GFLEEKAIVE PLEASKIDLL VVHSENYLNS LKSSATVARI
160 170 180 190 200
TEVPPVAFFP NFLVQQKVLY PFRKQVGGTI LAAKLATERG WAINIGGGFH
210 220 230 240 250
HCTAERGGGF CAFADISLCI HFAFLRLRIS RVMIIDLDAH QGNGHETDLG
260 270 280 290 300
DDNRVYILDM YNPNIYPFDY RARRFIDQNI EVVSGTTTDE YLRKLDEALE
310 320 330 340 350
VASRNFQPEL VIYNAGTDIL DGDPLGLLKI SPDGITSRDE KVFRFAREKS
360 370 380
IPLVMLTSGG YMKSSARVIA DSIENLSRQG LIQTRPE
Length:387
Mass (Da):43,714
Last modified:August 10, 2010 - v1
Checksum:i2B3B905FD46F4D49
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL348718 Genomic DNA. Translation: EFH50554.1.
RefSeqiXP_002874295.1. XM_002874249.1.

Genome annotation databases

EnsemblPlantsifgenesh2_kg.6__2585__AT5G26040.2; fgenesh2_kg.6__2585__AT5G26040.2; fgenesh2_kg.6__2585__AT5G26040.2.
GeneIDi9308264.
KEGGialy:ARALYDRAFT_489451.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL348718 Genomic DNA. Translation: EFH50554.1 .
RefSeqi XP_002874295.1. XM_002874249.1.

3D structure databases

ProteinModelPortali D7M4N5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi fgenesh2_kg.6__2585__AT5G26040.2 ; fgenesh2_kg.6__2585__AT5G26040.2 ; fgenesh2_kg.6__2585__AT5G26040.2 .
GeneIDi 9308264.
KEGGi aly:ARALYDRAFT_489451.

Phylogenomic databases

KOi K11418.

Family and domain databases

Gene3Di 3.40.800.20. 1 hit.
InterProi IPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
[Graphical view ]
PANTHERi PTHR10625. PTHR10625. 1 hit.
Pfami PF00850. Hist_deacetyl. 1 hit.
[Graphical view ]
PRINTSi PR01270. HDASUPER.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. MN47Imported.

Entry informationi

Entry nameiD7M4N5_ARALL
AccessioniPrimary (citable) accession number: D7M4N5
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: October 29, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3