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D7M1Q4

- D7M1Q4_ARALL

UniProt

D7M1Q4 - D7M1Q4_ARALL

Protein
Submitted name:

Putative uncharacterized protein

Gene

ARALYDRAFT_910342

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (10 Aug 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. dihydroorotate oxidase activity Source: InterPro

    GO - Biological processi

    1. 'de novo' pyrimidine nucleobase biosynthetic process Source: InterPro
    2. UMP biosynthetic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    ORF Names:ARALYDRAFT_910342Imported
    OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
    Taxonomic identifieri81972 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000008694: Unassembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. membrane Source: InterPro

    Family & Domainsi

    Phylogenomic databases

    KOiK00254.

    Family and domain databases

    Gene3Di3.20.20.70. 1 hit.
    InterProiIPR013785. Aldolase_TIM.
    IPR012135. Dihydroorotate_DH_1_2.
    IPR005719. Dihydroorotate_DH_2.
    IPR001295. Dihydroorotate_DH_CS.
    [Graphical view]
    PfamiPF01180. DHO_dh. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR01036. pyrD_sub2. 1 hit.
    PROSITEiPS00911. DHODEHASE_1. 1 hit.
    PS00912. DHODEHASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D7M1Q4-1 [UniParc]FASTAAdd to Basket

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    MAGRAATSSA NWAREFLFRR VSSNPLGATR NCSSVPGASS APKVPHFSKK    50
    GRILTGATIG LAIAGGAYVS TADEATFCGW LFNATKVVNP FFALLDAEFA 100
    HKLAVSAAAR GWVPREKRPD PAILGLEVWG RKFSNPIGLA AGFDKNAEAT 150
    EGLLGMGFGF VEVGSVTPVP QEGNPKPRIF RLSQEGAIIN RCGFNSEGIV 200
    VVAKRLGAQH GKRMLAETSG TSSSPSDDVK PGGKSGPGIL GVNLGKNKTS 250
    EDAAADYVQG VHNLSQYADY LVINVSSPNT AGLRMLQGRK QLKDLVKKVQ 300
    AARDEMQWGD EGPPPLLVKI APDLSRGELE DIAAVALALH LDGLIISNTT 350
    VSRPDPVSNN PVATEAGGLS GTPLFPLSTN MLRDMYTLTR GKIPLIGCGG 400
    VSSGEDAYKK IRAGATLVQL YTGFAYGGPA LIPQIKEELV KCLERDGFKS 450
    IHEAIGADHR 460
    Length:460
    Mass (Da):48,485
    Last modified:August 10, 2010 - v1
    Checksum:iA6ECCCA44FF469FA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL348718 Genomic DNA. Translation: EFH50382.1.
    RefSeqiXP_002874123.1. XM_002874077.1.

    Genome annotation databases

    EnsemblPlantsiscaffold_602399.1; scaffold_602399.1; scaffold_602399.1.
    GeneIDi9308119.
    KEGGialy:ARALYDRAFT_910342.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL348718 Genomic DNA. Translation: EFH50382.1 .
    RefSeqi XP_002874123.1. XM_002874077.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi scaffold_602399.1 ; scaffold_602399.1 ; scaffold_602399.1 .
    GeneIDi 9308119.
    KEGGi aly:ARALYDRAFT_910342.

    Phylogenomic databases

    KOi K00254.

    Family and domain databases

    Gene3Di 3.20.20.70. 1 hit.
    InterProi IPR013785. Aldolase_TIM.
    IPR012135. Dihydroorotate_DH_1_2.
    IPR005719. Dihydroorotate_DH_2.
    IPR001295. Dihydroorotate_DH_CS.
    [Graphical view ]
    Pfami PF01180. DHO_dh. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR01036. pyrD_sub2. 1 hit.
    PROSITEi PS00911. DHODEHASE_1. 1 hit.
    PS00912. DHODEHASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. MN47Imported.

    Entry informationi

    Entry nameiD7M1Q4_ARALL
    AccessioniPrimary (citable) accession number: D7M1Q4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 10, 2010
    Last sequence update: August 10, 2010
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3