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D7LWZ5

- D7LWZ5_ARALL

UniProt

D7LWZ5 - D7LWZ5_ARALL

Protein

Glutamate decarboxylase

Gene

ARALYDRAFT_488599

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 27 (01 Oct 2014)
      Sequence version 1 (10 Aug 2010)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro
    2. response to cadmium ion Source: EnsemblPlants/Gramene

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    ORF Names:ARALYDRAFT_488599Imported
    OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
    Taxonomic identifieri81972 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000008694: Unassembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. cytosol Source: EnsemblPlants/Gramene

    Structurei

    3D structure databases

    ProteinModelPortaliD7LWZ5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D7LWZ5-1 [UniParc]FASTAAdd to Basket

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    MVLSHAASES DVSVHSTFAS RYVRTSLPRF KMPENSIPKE AAYQIINDEL    50
    MLDGNPRLNL ASFVTTWMEP ECDKLIMSSI NKNYVDMDEY PVTTELQNRC 100
    VNMIAHLFNA PLGETETAVG VGTVGSSEAI MLAGLAFKRK WQNKRKAEGK 150
    PVDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLSEGYYVM DPQKAVDMVD 200
    ENTICVAAIL GSTLNGEFED VKLLNDLLVE KNKETGWDTP IHVDAASGGF 250
    IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RNKEDLPEEL 300
    IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGHEGY TNVMENCREN 350
    MIVLRKGLEK TERFNIVSKD EGVPLVAFSL KDNSSHTEFE ISDMLRRYGW 400
    IVPAYTMPPN AQHITVLRVV IREDFSRTLA ERLVIDIEKV MRELDELPSR 450
    VIHKISLGQE KSEANSDNVM VTVKKSDVEK QRDIIIGWKK FVADRKKTSG 500
    IC 502
    Length:502
    Mass (Da):56,933
    Last modified:August 10, 2010 - v1
    Checksum:i48C1FB7E1CC1742B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL348718 Genomic DNA. Translation: EFH48020.1.
    RefSeqiXP_002871761.1. XM_002871715.1.

    Genome annotation databases

    EnsemblPlantsifgenesh2_kg.6__1733__AT5G17330.1; fgenesh2_kg.6__1733__AT5G17330.1; fgenesh2_kg.6__1733__AT5G17330.1.
    GeneIDi9309890.
    KEGGialy:ARALYDRAFT_488599.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL348718 Genomic DNA. Translation: EFH48020.1 .
    RefSeqi XP_002871761.1. XM_002871715.1.

    3D structure databases

    ProteinModelPortali D7LWZ5.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi fgenesh2_kg.6__1733__AT5G17330.1 ; fgenesh2_kg.6__1733__AT5G17330.1 ; fgenesh2_kg.6__1733__AT5G17330.1 .
    GeneIDi 9309890.
    KEGGi aly:ARALYDRAFT_488599.

    Phylogenomic databases

    KOi K01580.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. MN47Imported.

    Entry informationi

    Entry nameiD7LWZ5_ARALL
    AccessioniPrimary (citable) accession number: D7LWZ5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 10, 2010
    Last sequence update: August 10, 2010
    Last modified: October 1, 2014
    This is version 27 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3