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D7LWZ5 (D7LWZ5_ARALL) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:ARALYDRAFT_488599 EMBL EFH48020.1
OrganismArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress) [Complete proteome]
Taxonomic identifier81972 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length502 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000382
   Molecular functionLyase RuleBase RU000382
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglutamate metabolic process

Inferred from electronic annotation. Source: InterPro

response to cadmium ion

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Cellular_componentcytosol

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionglutamate decarboxylase activity

Inferred from electronic annotation. Source: InterPro

pyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D7LWZ5 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: 48C1FB7E1CC1742B

FASTA50256,933
        10         20         30         40         50         60 
MVLSHAASES DVSVHSTFAS RYVRTSLPRF KMPENSIPKE AAYQIINDEL MLDGNPRLNL 

        70         80         90        100        110        120 
ASFVTTWMEP ECDKLIMSSI NKNYVDMDEY PVTTELQNRC VNMIAHLFNA PLGETETAVG 

       130        140        150        160        170        180 
VGTVGSSEAI MLAGLAFKRK WQNKRKAEGK PVDKPNIVTG ANVQVCWEKF ARYFEVELKE 

       190        200        210        220        230        240 
VKLSEGYYVM DPQKAVDMVD ENTICVAAIL GSTLNGEFED VKLLNDLLVE KNKETGWDTP 

       250        260        270        280        290        300 
IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RNKEDLPEEL 

       310        320        330        340        350        360 
IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGHEGY TNVMENCREN MIVLRKGLEK 

       370        380        390        400        410        420 
TERFNIVSKD EGVPLVAFSL KDNSSHTEFE ISDMLRRYGW IVPAYTMPPN AQHITVLRVV 

       430        440        450        460        470        480 
IREDFSRTLA ERLVIDIEKV MRELDELPSR VIHKISLGQE KSEANSDNVM VTVKKSDVEK 

       490        500 
QRDIIIGWKK FVADRKKTSG IC 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GL348718 Genomic DNA. Translation: EFH48020.1.
RefSeqXP_002871761.1. XM_002871715.1.

3D structure databases

ProteinModelPortalD7LWZ5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsfgenesh2_kg.6__1733__AT5G17330.1; fgenesh2_kg.6__1733__AT5G17330.1; fgenesh2_kg.6__1733__AT5G17330.1.
GeneID9309890.
KEGGaly:ARALYDRAFT_488599.

Phylogenomic databases

KOK01580.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD7LWZ5_ARALL
AccessionPrimary (citable) accession number: D7LWZ5
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: March 19, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)