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D7LWU5

- D7LWU5_ARALL

UniProt

D7LWU5 - D7LWU5_ARALL

Protein

Malate synthase

Gene

ARALYDRAFT_660232

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (10 Aug 2010)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA.UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei177 – 1771Proton acceptorUniRule annotation
    Active sitei463 – 4631Proton donorUniRule annotation

    GO - Molecular functioni

    1. malate synthase activity Source: UniProtKB-EC

    GO - Biological processi

    1. glyoxylate cycle Source: UniProtKB-UniPathway
    2. tricarboxylic acid cycle Source: UniProtKB-KW

    Keywords - Molecular functioni

    TransferaseUniRule annotation

    Keywords - Biological processi

    Glyoxylate bypassUniRule annotation, Tricarboxylic acid cycleUniRule annotation

    Enzyme and pathway databases

    UniPathwayiUPA00703; UER00720.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Malate synthaseUniRule annotation (EC:2.3.3.9UniRule annotation)
    Gene namesi
    ORF Names:ARALYDRAFT_660232Imported
    OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
    Taxonomic identifieri81972 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000008694: Unassembled WGS sequence

    Structurei

    3D structure databases

    ProteinModelPortaliD7LWU5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the malate synthase family.UniRule annotation

    Phylogenomic databases

    KOiK01638.

    Family and domain databases

    InterProiIPR011076. Malate_synth-like.
    IPR006252. Malate_synthA.
    IPR001465. Malate_synthase.
    IPR019830. Malate_synthase_CS.
    [Graphical view]
    PfamiPF01274. Malate_synthase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001363. Malate_synth. 1 hit.
    SUPFAMiSSF51645. SSF51645. 1 hit.
    TIGRFAMsiTIGR01344. malate_syn_A. 1 hit.
    PROSITEiPS00510. MALATE_SYNTHASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D7LWU5-1 [UniParc]FASTAAdd to Basket

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    MELETSVYRP NVAVYDSPDG VEVRGRYDQI FAKILTREAL NFVAELQREF    50
    RGHVRYAMEC RREARRRYNS GAVPGFDPST KFIRDGDWIC ASVPPAVADR 100
    RVEITGPVER KMIINALNSG AKVFMADFED ALSPSWENLM RGHVNLKDAV 150
    DGSITFHDKS RNRVYKLNDQ TAKLFVRPRG WHLPEAHILI DGEPATGCLV 200
    DFGLYFFHNY AKFRQTQGSG FGPFFYLPKM EHSREAKIWN SVFERAEKMA 250
    GIERGSIRAT VLIETLPAVF QMNEILYELR DHTVGLNCGR WDYIFSYVKT 300
    FQAHPDRLLP DRVLVGMGQH FMRSYSDLLI RTCHKRGVHA MGGMAAQIPI 350
    RDDPKANEMA LDLVRKDKLR EVRAGHDGTW AAHPGLIPIC MEAFTGHMGK 400
    SPNQIKSVKR EDAAAITEED LLQIPRGVRT LEGLRLNTRV GIQYLAAWLT 450
    GSGSVPLYNL MEDAATAEIS RVQNWQWIRY GVELDGDGLG VRVTKELFGR 500
    VVEEEMERIE KEVGKDKFKK GMYKEACKMF TKQCTAPELD DFLTLAVYNH 550
    IVAHYPINNS RL 562
    Length:562
    Mass (Da):64,025
    Last modified:August 10, 2010 - v1
    Checksum:i39289EC085288697
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL348718 Genomic DNA. Translation: EFH49378.1.
    RefSeqiXP_002873119.1. XM_002873073.1.

    Genome annotation databases

    EnsemblPlantsiAl_scaffold_0006_297; Al_scaffold_0006_297; Al_scaffold_0006_297.
    GeneIDi9309187.
    KEGGialy:ARALYDRAFT_660232.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL348718 Genomic DNA. Translation: EFH49378.1 .
    RefSeqi XP_002873119.1. XM_002873073.1.

    3D structure databases

    ProteinModelPortali D7LWU5.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi Al_scaffold_0006_297 ; Al_scaffold_0006_297 ; Al_scaffold_0006_297 .
    GeneIDi 9309187.
    KEGGi aly:ARALYDRAFT_660232.

    Phylogenomic databases

    KOi K01638.

    Enzyme and pathway databases

    UniPathwayi UPA00703 ; UER00720 .

    Family and domain databases

    InterProi IPR011076. Malate_synth-like.
    IPR006252. Malate_synthA.
    IPR001465. Malate_synthase.
    IPR019830. Malate_synthase_CS.
    [Graphical view ]
    Pfami PF01274. Malate_synthase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001363. Malate_synth. 1 hit.
    SUPFAMi SSF51645. SSF51645. 1 hit.
    TIGRFAMsi TIGR01344. malate_syn_A. 1 hit.
    PROSITEi PS00510. MALATE_SYNTHASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. MN47Imported.

    Entry informationi

    Entry nameiD7LWU5_ARALL
    AccessioniPrimary (citable) accession number: D7LWU5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 10, 2010
    Last sequence update: August 10, 2010
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3