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D7LWU5

- D7LWU5_ARALL

UniProt

D7LWU5 - D7LWU5_ARALL

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Protein

Malate synthase

Gene
ARALYDRAFT_660232
Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei177 – 1771Proton acceptor By similarityUniRule annotation
Active sitei463 – 4631Proton donor By similarityUniRule annotation

GO - Molecular functioni

  1. malate synthase activity Source: UniProtKB-EC

GO - Biological processi

  1. glyoxylate cycle Source: UniProtKB-UniPathway
  2. tricarboxylic acid cycle Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

TransferaseUniRule annotation

Keywords - Biological processi

Glyoxylate bypassUniRule annotation, Tricarboxylic acid cycleUniRule annotation

Enzyme and pathway databases

UniPathwayiUPA00703; UER00720.

Names & Taxonomyi

Protein namesi
Recommended name:
Malate synthaseUniRule annotation (EC:2.3.3.9UniRule annotation)
Gene namesi
ORF Names:ARALYDRAFT_660232Imported
OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Taxonomic identifieri81972 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000008694: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliD7LWU5.

Family & Domainsi

Sequence similaritiesi

Belongs to the malate synthase family.UniRule annotation

Phylogenomic databases

KOiK01638.

Family and domain databases

InterProiIPR011076. Malate_synth-like.
IPR006252. Malate_synthA.
IPR001465. Malate_synthase.
IPR019830. Malate_synthase_CS.
[Graphical view]
PfamiPF01274. Malate_synthase. 1 hit.
[Graphical view]
PIRSFiPIRSF001363. Malate_synth. 1 hit.
SUPFAMiSSF51645. SSF51645. 1 hit.
TIGRFAMsiTIGR01344. malate_syn_A. 1 hit.
PROSITEiPS00510. MALATE_SYNTHASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D7LWU5-1 [UniParc]FASTAAdd to Basket

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MELETSVYRP NVAVYDSPDG VEVRGRYDQI FAKILTREAL NFVAELQREF    50
RGHVRYAMEC RREARRRYNS GAVPGFDPST KFIRDGDWIC ASVPPAVADR 100
RVEITGPVER KMIINALNSG AKVFMADFED ALSPSWENLM RGHVNLKDAV 150
DGSITFHDKS RNRVYKLNDQ TAKLFVRPRG WHLPEAHILI DGEPATGCLV 200
DFGLYFFHNY AKFRQTQGSG FGPFFYLPKM EHSREAKIWN SVFERAEKMA 250
GIERGSIRAT VLIETLPAVF QMNEILYELR DHTVGLNCGR WDYIFSYVKT 300
FQAHPDRLLP DRVLVGMGQH FMRSYSDLLI RTCHKRGVHA MGGMAAQIPI 350
RDDPKANEMA LDLVRKDKLR EVRAGHDGTW AAHPGLIPIC MEAFTGHMGK 400
SPNQIKSVKR EDAAAITEED LLQIPRGVRT LEGLRLNTRV GIQYLAAWLT 450
GSGSVPLYNL MEDAATAEIS RVQNWQWIRY GVELDGDGLG VRVTKELFGR 500
VVEEEMERIE KEVGKDKFKK GMYKEACKMF TKQCTAPELD DFLTLAVYNH 550
IVAHYPINNS RL 562
Length:562
Mass (Da):64,025
Last modified:August 10, 2010 - v1
Checksum:i39289EC085288697
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL348718 Genomic DNA. Translation: EFH49378.1.
RefSeqiXP_002873119.1. XM_002873073.1.

Genome annotation databases

EnsemblPlantsiAl_scaffold_0006_297; Al_scaffold_0006_297; Al_scaffold_0006_297.
GeneIDi9309187.
KEGGialy:ARALYDRAFT_660232.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL348718 Genomic DNA. Translation: EFH49378.1 .
RefSeqi XP_002873119.1. XM_002873073.1.

3D structure databases

ProteinModelPortali D7LWU5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Al_scaffold_0006_297 ; Al_scaffold_0006_297 ; Al_scaffold_0006_297 .
GeneIDi 9309187.
KEGGi aly:ARALYDRAFT_660232.

Phylogenomic databases

KOi K01638.

Enzyme and pathway databases

UniPathwayi UPA00703 ; UER00720 .

Family and domain databases

InterProi IPR011076. Malate_synth-like.
IPR006252. Malate_synthA.
IPR001465. Malate_synthase.
IPR019830. Malate_synthase_CS.
[Graphical view ]
Pfami PF01274. Malate_synthase. 1 hit.
[Graphical view ]
PIRSFi PIRSF001363. Malate_synth. 1 hit.
SUPFAMi SSF51645. SSF51645. 1 hit.
TIGRFAMsi TIGR01344. malate_syn_A. 1 hit.
PROSITEi PS00510. MALATE_SYNTHASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. MN47.

Entry informationi

Entry nameiD7LWU5_ARALL
AccessioniPrimary (citable) accession number: D7LWU5
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: June 11, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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