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D7LWU5

- D7LWU5_ARALL

UniProt

D7LWU5 - D7LWU5_ARALL

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Protein

Malate synthase

Gene

ARALYDRAFT_660232

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei177 – 1771Proton acceptorUniRule annotation
Active sitei463 – 4631Proton donorUniRule annotation

GO - Molecular functioni

  1. malate synthase activity Source: UniProtKB-EC

GO - Biological processi

  1. glyoxylate cycle Source: UniProtKB-UniPathway
  2. tricarboxylic acid cycle Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

TransferaseUniRule annotation

Keywords - Biological processi

Glyoxylate bypassUniRule annotation, Tricarboxylic acid cycleUniRule annotation

Enzyme and pathway databases

UniPathwayiUPA00703; UER00720.

Names & Taxonomyi

Protein namesi
Recommended name:
Malate synthaseUniRule annotation (EC:2.3.3.9UniRule annotation)
Gene namesi
ORF Names:ARALYDRAFT_660232Imported
OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
Taxonomic identifieri81972 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000008694: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliD7LWU5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the malate synthase family.UniRule annotation

Phylogenomic databases

KOiK01638.

Family and domain databases

InterProiIPR011076. Malate_synth-like.
IPR006252. Malate_synthA.
IPR001465. Malate_synthase.
IPR019830. Malate_synthase_CS.
[Graphical view]
PfamiPF01274. Malate_synthase. 1 hit.
[Graphical view]
PIRSFiPIRSF001363. Malate_synth. 1 hit.
SUPFAMiSSF51645. SSF51645. 1 hit.
TIGRFAMsiTIGR01344. malate_syn_A. 1 hit.
PROSITEiPS00510. MALATE_SYNTHASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D7LWU5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MELETSVYRP NVAVYDSPDG VEVRGRYDQI FAKILTREAL NFVAELQREF
60 70 80 90 100
RGHVRYAMEC RREARRRYNS GAVPGFDPST KFIRDGDWIC ASVPPAVADR
110 120 130 140 150
RVEITGPVER KMIINALNSG AKVFMADFED ALSPSWENLM RGHVNLKDAV
160 170 180 190 200
DGSITFHDKS RNRVYKLNDQ TAKLFVRPRG WHLPEAHILI DGEPATGCLV
210 220 230 240 250
DFGLYFFHNY AKFRQTQGSG FGPFFYLPKM EHSREAKIWN SVFERAEKMA
260 270 280 290 300
GIERGSIRAT VLIETLPAVF QMNEILYELR DHTVGLNCGR WDYIFSYVKT
310 320 330 340 350
FQAHPDRLLP DRVLVGMGQH FMRSYSDLLI RTCHKRGVHA MGGMAAQIPI
360 370 380 390 400
RDDPKANEMA LDLVRKDKLR EVRAGHDGTW AAHPGLIPIC MEAFTGHMGK
410 420 430 440 450
SPNQIKSVKR EDAAAITEED LLQIPRGVRT LEGLRLNTRV GIQYLAAWLT
460 470 480 490 500
GSGSVPLYNL MEDAATAEIS RVQNWQWIRY GVELDGDGLG VRVTKELFGR
510 520 530 540 550
VVEEEMERIE KEVGKDKFKK GMYKEACKMF TKQCTAPELD DFLTLAVYNH
560
IVAHYPINNS RL
Length:562
Mass (Da):64,025
Last modified:August 10, 2010 - v1
Checksum:i39289EC085288697
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL348718 Genomic DNA. Translation: EFH49378.1.
RefSeqiXP_002873119.1. XM_002873073.1.

Genome annotation databases

EnsemblPlantsiAl_scaffold_0006_297; Al_scaffold_0006_297; Al_scaffold_0006_297.
GeneIDi9309187.
KEGGialy:ARALYDRAFT_660232.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL348718 Genomic DNA. Translation: EFH49378.1 .
RefSeqi XP_002873119.1. XM_002873073.1.

3D structure databases

ProteinModelPortali D7LWU5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Al_scaffold_0006_297 ; Al_scaffold_0006_297 ; Al_scaffold_0006_297 .
GeneIDi 9309187.
KEGGi aly:ARALYDRAFT_660232.

Phylogenomic databases

KOi K01638.

Enzyme and pathway databases

UniPathwayi UPA00703 ; UER00720 .

Family and domain databases

InterProi IPR011076. Malate_synth-like.
IPR006252. Malate_synthA.
IPR001465. Malate_synthase.
IPR019830. Malate_synthase_CS.
[Graphical view ]
Pfami PF01274. Malate_synthase. 1 hit.
[Graphical view ]
PIRSFi PIRSF001363. Malate_synth. 1 hit.
SUPFAMi SSF51645. SSF51645. 1 hit.
TIGRFAMsi TIGR01344. malate_syn_A. 1 hit.
PROSITEi PS00510. MALATE_SYNTHASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. MN47Imported.

Entry informationi

Entry nameiD7LWU5_ARALL
AccessioniPrimary (citable) accession number: D7LWU5
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: October 1, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3