D7LRU1 (D7LRU1_ARALL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EFH52839.1

Gene names

ORF Names:

ARALYDRAFT_486548 EMBL EFH52839.1

Organism

Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress) [Complete proteome]

Taxonomic identifier

81972 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis › Arabidopsis lyrata

Protein attributes

Sequence length	741 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	transketolase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D7LRU1 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: CCFFA67ED3650B54	FASTA	741	79,851
	10 20 30 40 50 60 MASTSSLALS QALLARAISH HGSDQRGSLP AFSGLKSTGS RASASSRRRI AQSMNKNRSL 70 80 90 100 110 120 RPLVRAAAVE TVEPTTDSSI VDKSVNSIRF LAIDAVEKAN SGHPGLPMGC APMAHILYDE 130 140 150 160 170 180 VMRYNPKNPY WFNRDRFVLS AGHGCMLLYA LLHLAGYDSV QEEDLKQFRQ LGSKTPGHPE 190 200 210 220 230 240 NFETPGIEVT TGPLGQGIAN AVGLALAEKH LAARFNKPDA EVVDHYTYAI LGDGCQMEGI 250 260 270 280 290 300 SNEACSLAGH WGLGKLIAFY DDNHISIDGD TEIAFTENVD QRFEALGWHV IWVKNGNTGY 310 320 330 340 350 360 DEIRAAIKEA KAVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY 370 380 390 400 410 420 EPFQVPDDVK SHWSRHTPEG ATLESDWSAK FAAYEKKYPE EAAELKSIIT GELPAGWEKA 430 440 450 460 470 480 LPTYTPESPG DATRNLSQQC LNALAKVIPG FLGGSADLAS SNMTLLKAFG DFQKATPEER 490 500 510 520 530 540 NLRFGVREHG MGAISNGIAL HSPGLIPYCA TFFVFTDYMR GAMRISALSE AGVIYVMTHD 550 560 570 580 590 600 SIGLGEDGPT HQPIEHIASF RAMPNTLMFR PADGNETAGA YKIAVTKRKT PSILALSRQK 610 620 630 640 650 660 LPQLPGTSIE GVEKGGYTIS DDSSGNKPDV ILIGTGSELE IAAQAAEVLR KEGKTVRVVS 670 680 690 700 710 720 FVCWELFDEQ SDEYKESVLP SDVSARVSIE AASTFGWGKI VGGKGKSIGI NSFGASAPAP 730 740 LLYKEFGITV EAVVDAAKSF F

References

[1]

"The Arabidopsis lyrata genome sequence and the basis of rapid genome size change." Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M., Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G., Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K., Spannagl M., Wang X. , Yang L., Nasrallah M.E., Bergelson J., Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y., Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L. Nat. Genet. 43:476-481(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. MN47.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GL348717 Genomic DNA. Translation: EFH52839.1.
RefSeq	XP_002876580.1. XM_002876534.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	9314416.
KEGG	aly:ARALYDRAFT_486548.
Phylogenomic databases
KO	K00615.
Family and domain databases
Gene3D	3.40.50.920. 1 hit.
InterPro	IPR009014. Transketo_C/Pyr-ferredox_oxred. IPR015941. Transketolase-like_C. IPR005475. Transketolase-like_Pyr-bd. IPR005478. Transketolase_bac-like. IPR020826. Transketolase_BS. IPR005476. Transketolase_C. IPR005474. Transketolase_N. [Graphical view]
Pfam	PF02779. Transket_pyr. 1 hit. PF02780. Transketolase_C. 1 hit. PF00456. Transketolase_N. 1 hit. [Graphical view]
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
SUPFAM	SSF52922. Transketo_C_like. 1 hit.
TIGRFAMs	TIGR00232. tktlase_bact. 1 hit.
PROSITE	PS00801. TRANSKETOLASE_1. 1 hit. PS00802. TRANSKETOLASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D7LRU1_ARALL

Accession

Primary (citable) accession number: D7LRU1

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	March 6, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)