D7LPF8 (D7LPF8_ARALL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Succinate dehydrogenase 2-1 EMBL EFH53306.1

Gene names

Name:	SDH2-1 EMBL EFH53306.1
ORF Names:	ARALYDRAFT_904976 EMBL EFH53306.1

Organism

Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress) [Complete proteome]

Taxonomic identifier

81972 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis › Arabidopsis lyrata

Protein attributes

Sequence length	279 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	2 iron, 2 sulfur cluster binding Inferred from electronic annotation. Source: InterPro electron carrier activity Inferred from electronic annotation. Source: InterPro oxidoreductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D7LPF8 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: A3EFB25BAD915992	FASTA	279	30,987
	10 20 30 40 50 60 MASGLIGRLV GTKPSKLATA ARLIPARWTS TGAEAETKAS SGGGRGSNLK TFQIYRWNPD 70 80 90 100 110 120 NPGKPELKDY QVDLKDCGPM VLDALIKIKN EMDPSLTFRR SCREGICGSC AMNIDGCNGL 130 140 150 160 170 180 ACLTKIEDGS SGTTITPLPH MFVIKDLVVD MTNFYNQYKS IEPWLKRKTP ASVPAKEILQ 190 200 210 220 230 240 SKKDRAKLDG MYECILCACC STSCPSYWWN PESYLGPAAL LHANRWISDS RDEYTKERLE 250 260 270 AVDDEFKLYR CHTILNCARA CPKGLNPGKQ IAHIKQLQR

References

[1]

"The Arabidopsis lyrata genome sequence and the basis of rapid genome size change." Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M., Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G., Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K., Spannagl M., Wang X. , Yang L., Nasrallah M.E., Bergelson J., Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y., Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L. Nat. Genet. 43:476-481(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. MN47.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GL348717 Genomic DNA. Translation: EFH53306.1.
RefSeq	XP_002877047.1. XM_002877001.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	9313115.
KEGG	aly:ARALYDRAFT_904976.
Phylogenomic databases
KO	K00235.
Family and domain databases
Gene3D	1.10.1060.10. 1 hit. 3.10.20.30. 1 hit.
InterPro	IPR001041. 2Fe-2S_ferredoxin-type. IPR006058. 2Fe2S_fd_BS. IPR017896. 4Fe4S_Fe-S-bd. IPR017900. 4Fe4S_Fe_S_CS. IPR012675. Beta-grasp_dom. IPR012285. Fum_reductase_C. IPR009051. Helical_ferredxn. IPR004489. Succ_DH/fum_Rdtase_Fe-S. IPR025192. Succ_DH/fum_Rdtase_N. [Graphical view]
Pfam	PF13085. Fer2_3. 1 hit. [Graphical view]
SUPFAM	SSF54292. Ferredoxin. 1 hit. SSF46548. Helical_ferredxn. 1 hit.
TIGRFAMs	TIGR00384. dhsB. 1 hit.
PROSITE	PS00197. 2FE2S_FER_1. 1 hit. PS51085. 2FE2S_FER_2. 1 hit. PS00198. 4FE4S_FER_1. 1 hit. PS51379. 4FE4S_FER_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D7LPF8_ARALL

Accession

Primary (citable) accession number: D7LPF8

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	March 6, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)