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D7LPF8

- D7LPF8_ARALL

UniProt

D7LPF8 - D7LPF8_ARALL

Protein
Submitted name:

Succinate dehydrogenase 2-1

Gene

SDH2-1

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (10 Aug 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. 2 iron, 2 sulfur cluster binding Source: InterPro
    2. electron carrier activity Source: InterPro
    3. oxidoreductase activity Source: InterPro
    4. zinc ion binding Source: EnsemblPlants/Gramene

    GO - Biological processi

    1. tricarboxylic acid cycle Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Succinate dehydrogenase 2-1Imported
    Gene namesi
    Name:SDH2-1Imported
    ORF Names:ARALYDRAFT_904976Imported
    OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
    Taxonomic identifieri81972 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000008694: Unassembled WGS sequence

    Family & Domainsi

    Phylogenomic databases

    KOiK00235.

    Family and domain databases

    Gene3Di3.10.20.30. 1 hit.
    InterProiIPR001041. 2Fe-2S_ferredoxin-type.
    IPR006058. 2Fe2S_fd_BS.
    IPR017896. 4Fe4S_Fe-S-bd.
    IPR017900. 4Fe4S_Fe_S_CS.
    IPR012675. Beta-grasp_dom.
    IPR009051. Helical_ferredxn.
    IPR004489. Succ_DH/fum_Rdtase_Fe-S.
    IPR025192. Succ_DH/fum_Rdtase_N.
    [Graphical view]
    PfamiPF13085. Fer2_3. 1 hit.
    [Graphical view]
    SUPFAMiSSF46548. SSF46548. 1 hit.
    SSF54292. SSF54292. 1 hit.
    TIGRFAMsiTIGR00384. dhsB. 1 hit.
    PROSITEiPS00197. 2FE2S_FER_1. 1 hit.
    PS51085. 2FE2S_FER_2. 1 hit.
    PS00198. 4FE4S_FER_1. 1 hit.
    PS51379. 4FE4S_FER_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D7LPF8-1 [UniParc]FASTAAdd to Basket

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    MASGLIGRLV GTKPSKLATA ARLIPARWTS TGAEAETKAS SGGGRGSNLK    50
    TFQIYRWNPD NPGKPELKDY QVDLKDCGPM VLDALIKIKN EMDPSLTFRR 100
    SCREGICGSC AMNIDGCNGL ACLTKIEDGS SGTTITPLPH MFVIKDLVVD 150
    MTNFYNQYKS IEPWLKRKTP ASVPAKEILQ SKKDRAKLDG MYECILCACC 200
    STSCPSYWWN PESYLGPAAL LHANRWISDS RDEYTKERLE AVDDEFKLYR 250
    CHTILNCARA CPKGLNPGKQ IAHIKQLQR 279
    Length:279
    Mass (Da):30,987
    Last modified:August 10, 2010 - v1
    Checksum:iA3EFB25BAD915992
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL348717 Genomic DNA. Translation: EFH53306.1.
    RefSeqiXP_002877047.1. XM_002877001.1.

    Genome annotation databases

    EnsemblPlantsiscaffold_500680.1; scaffold_500680.1; scaffold_500680.1.
    GeneIDi9313115.
    KEGGialy:ARALYDRAFT_904976.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL348717 Genomic DNA. Translation: EFH53306.1 .
    RefSeqi XP_002877047.1. XM_002877001.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi scaffold_500680.1 ; scaffold_500680.1 ; scaffold_500680.1 .
    GeneIDi 9313115.
    KEGGi aly:ARALYDRAFT_904976.

    Phylogenomic databases

    KOi K00235.

    Family and domain databases

    Gene3Di 3.10.20.30. 1 hit.
    InterProi IPR001041. 2Fe-2S_ferredoxin-type.
    IPR006058. 2Fe2S_fd_BS.
    IPR017896. 4Fe4S_Fe-S-bd.
    IPR017900. 4Fe4S_Fe_S_CS.
    IPR012675. Beta-grasp_dom.
    IPR009051. Helical_ferredxn.
    IPR004489. Succ_DH/fum_Rdtase_Fe-S.
    IPR025192. Succ_DH/fum_Rdtase_N.
    [Graphical view ]
    Pfami PF13085. Fer2_3. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46548. SSF46548. 1 hit.
    SSF54292. SSF54292. 1 hit.
    TIGRFAMsi TIGR00384. dhsB. 1 hit.
    PROSITEi PS00197. 2FE2S_FER_1. 1 hit.
    PS51085. 2FE2S_FER_2. 1 hit.
    PS00198. 4FE4S_FER_1. 1 hit.
    PS51379. 4FE4S_FER_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. MN47Imported.

    Entry informationi

    Entry nameiD7LPF8_ARALL
    AccessioniPrimary (citable) accession number: D7LPF8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 10, 2010
    Last sequence update: August 10, 2010
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3