Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

D7LFS4

- D7LFS4_ARALL

UniProt

D7LFS4 - D7LFS4_ARALL

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Putative uncharacterized protein

Gene

ARALYDRAFT_902401

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. histone-lysine N-methyltransferase activity Source: EnsemblPlants/Gramene
  2. zinc ion binding Source: EnsemblPlants/Gramene

GO - Biological processi

  1. cullin deneddylation Source: EnsemblPlants/Gramene
  2. photomorphogenesis Source: EnsemblPlants/Gramene
  3. positive regulation of transcription, DNA-templated Source: EnsemblPlants/Gramene
  4. protein deubiquitination Source: EnsemblPlants/Gramene
  5. protein ubiquitination Source: EnsemblPlants/Gramene
  6. regulation of gene expression, epigenetic Source: EnsemblPlants/Gramene
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:ARALYDRAFT_902401Imported
OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
Taxonomic identifieri81972 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000008694: Unassembled WGS sequence

Subcellular locationi

Nucleus UniRule annotation

GO - Cellular componenti

  1. chromosome, centromeric region Source: EnsemblPlants/Gramene
  2. nuclear heterochromatin Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Cellular componenti

ChromosomeSAAS annotation, NucleusUniRule annotationSAAS annotation

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation
Contains 1 pre-SET domain.UniRule annotation
Contains SET domain.SAAS annotation
Contains pre-SET domain.SAAS annotation

Phylogenomic databases

KOiK11420.

Family and domain databases

Gene3Di2.30.280.10. 1 hit.
InterProiIPR025794. Hist-Lys_N-MeTrfase_plant.
IPR007728. Pre-SET_dom.
IPR003606. Pre-SET_Zn-bd_sub.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view]
PfamiPF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00468. PreSET. 1 hit.
SM00317. SET. 1 hit.
SM00466. SRA. 1 hit.
[Graphical view]
SUPFAMiSSF88697. SSF88697. 1 hit.
PROSITEiPS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D7LFS4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSTVVPFPDL NLMPASQSST AGTTAGDTVV TGKLEVKAEP VEECQTPPSS
60 70 80 90 100
FSDQSASTDL IAEFIRISKL FRSAFKPHQI EGLDGVSVYG LDSGAIVTVP
110 120 130 140 150
EEENRELIKP PPGFGDNRVS TVVVSPPPTK FERPRELARI AILGHDQRKE
160 170 180 190 200
LRQVMKRTRM TYESLRIHLM AESMKNPVLG QGRRRRSDMA AAYIMRDRGL
210 220 230 240 250
WLNYDKHIVG PISGVEIGDI FFYRMELCVV GLHGQTQAGI DCLTAERSAT
260 270 280 290 300
GEPIATSIVV SGGYEDDEDT GDVLVYTGHG GQDKQHKQCD NQRLVGGNLG
310 320 330 340 350
MERSMHYGIE VRVIRGIKYE NSISSKVYVY DGLYKIVDCW FAVGKSGFGV
360 370 380 390 400
FKFRLVRMDG QPMMGSAVMR FAQTLRSKPL MVRPTGYVSF DLSNKKENVP
410 420 430 440 450
VFLYNDVDGD QEPRHYEYIA KSVFPPGIFG QGGISRTGCD CKLSCTDDCL
460 470 480 490 500
CARKNGGEFA YDDNGHLLRG KDVVFECGEL CTCGPNCKSR VTQKGLRNRL
510 520 530 540 550
EVFRSKETGW GVRTLDLIEA GAFICEYAGV VVTRHQAEIL SMNGDVMVYP
560 570 580 590 600
GRFTDKWRNW GDLSQVYPDS VRPDYPSLPP LDFAMDVSRM RNVACYISHS
610 620 630 640 650
KDPNVMVQFV LYDHNHLMFP RVMLFALENI SPLAELSLDY GLADEVNGKL

AICN
Length:654
Mass (Da):72,793
Last modified:August 10, 2010 - v1
Checksum:i81B786192BF757FB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL348716 Genomic DNA. Translation: EFH55704.1.
RefSeqiXP_002879445.1. XM_002879399.1.

Genome annotation databases

EnsemblPlantsiscaffold_401902.1; scaffold_401902.1; scaffold_401902.1.
GeneIDi9317341.
KEGGialy:ARALYDRAFT_902401.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL348716 Genomic DNA. Translation: EFH55704.1 .
RefSeqi XP_002879445.1. XM_002879399.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi scaffold_401902.1 ; scaffold_401902.1 ; scaffold_401902.1 .
GeneIDi 9317341.
KEGGi aly:ARALYDRAFT_902401.

Phylogenomic databases

KOi K11420.

Family and domain databases

Gene3Di 2.30.280.10. 1 hit.
InterProi IPR025794. Hist-Lys_N-MeTrfase_plant.
IPR007728. Pre-SET_dom.
IPR003606. Pre-SET_Zn-bd_sub.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view ]
Pfami PF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view ]
SMARTi SM00468. PreSET. 1 hit.
SM00317. SET. 1 hit.
SM00466. SRA. 1 hit.
[Graphical view ]
SUPFAMi SSF88697. SSF88697. 1 hit.
PROSITEi PS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. MN47Imported.

Entry informationi

Entry nameiD7LFS4_ARALL
AccessioniPrimary (citable) accession number: D7LFS4
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: November 26, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3