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Protein

Glutamate decarboxylase

Gene

ARALYDRAFT_898127

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: EnsemblPlants/Gramene

GO - Biological processi

  1. glutamate metabolic process Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
ORF Names:ARALYDRAFT_898127Imported
OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
Taxonomic identifieri81972 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000008694 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. plasmodesma Source: EnsemblPlants/Gramene
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliD7L7C7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

D7L7C7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLATNSDSE EHLHSTFASR YVRAVVPRFK MPDHCMPKDA AYQVINDELM
60 70 80 90 100
LDGNPRLNLA SFVTTWMEPE CDKLIMDSVN KNYVDMDEYP VTTELQNRCV
110 120 130 140 150
NMIANLFHAP VGEGEAAIGC GTVGSSEAIM LAGLAFKRKW QHRRRAQGLS
160 170 180 190 200
TDKPNIVTGA NVQVCWEKFA RYFEVELKEV KLSEDYYVMD PAKAVEMVDE
210 220 230 240 250
NTICVAAILG STLTGEFEDV KLLNDLLAEK NAETGWETPI HVDAASGGFI
260 270 280 290 300
APFLYPDLEW DFRLPWVKSI NVSGHKYGLV YAGVGWIVWR TKDDLPEELV
310 320 330 340 350
FHINYLGADQ PTFTLNFSKG SSQIIAQYYQ FIRLGFEGYK NIMENCMDNA
360 370 380 390 400
RRLREGIEMT GKFHILSKDI GVPLVAFSLK DSSKHTVFEI AESLRKFGWI
410 420 430 440 450
IPAYTMPADA QHIAVLRVVI REDFSRGLAD RLITHIIQVL KEIEGLPSRI
460 470 480 490
AHLAAAAAVS GDDEVKVKTA KMSLEDITKY WKRLVEHKRN IVC
Length:493
Mass (Da):55,639
Last modified:August 9, 2010 - v1
Checksum:i6B514866AF1AE9D0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL348715 Genomic DNA. Translation: EFH61486.1.
RefSeqiXP_002885227.1. XM_002885181.1.

Genome annotation databases

EnsemblPlantsiscaffold_302097.1; scaffold_302097.1; scaffold_302097.1.
GeneIDi9319152.
KEGGialy:ARALYDRAFT_898127.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL348715 Genomic DNA. Translation: EFH61486.1.
RefSeqiXP_002885227.1. XM_002885181.1.

3D structure databases

ProteinModelPortaliD7L7C7.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiscaffold_302097.1; scaffold_302097.1; scaffold_302097.1.
GeneIDi9319152.
KEGGialy:ARALYDRAFT_898127.

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. MN47Imported.

Entry informationi

Entry nameiD7L7C7_ARALL
AccessioniPrimary (citable) accession number: D7L7C7
Entry historyi
Integrated into UniProtKB/TrEMBL: August 9, 2010
Last sequence update: August 9, 2010
Last modified: February 3, 2015
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.