D7L4S9 (D7L4S9_ARALL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
TMS membrane family protein EMBL EFH58711.1

Gene names

ORF Names:

ARALYDRAFT_896727 EMBL EFH58711.1

Organism

Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress) [Complete proteome]

Taxonomic identifier

81972 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis › Arabidopsis lyrata

Protein attributes

Sequence length	410 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	membrane Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D7L4S9 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: FC8886E8AB64AA18	FASTA	410	45,046
	10 20 30 40 50 60 MACCLASCCA SATCGLCSSV ASGITRKSAR IAYCGLFGAS LVVSWILRET GAPLLEKLPW 70 80 90 100 110 120 INTSDSYSKE WYQQQAVLRV SFGNFLFFAI YALIMIGVKD QNDRRDSWHH GGWGLKMIAW 130 140 150 160 170 180 FLLVVLMFFV PNVIVSIYGT LSKFGAGAFL LVQVVLLLDA THNWNDSWVE KDEKKWYIAL 190 200 210 220 230 240 LVISIVCYIA TYAFSGILFI WFNPSGQDCG LNVFFIVVPM ILAFVFAIIA LHPAVNGSLL 250 260 270 280 290 300 PASVISVYCA YVCYTGLSSE PHDYVCNGLN KSKAVNASTL ILGMLTTVLS VLYSALRAGS 310 320 330 340 350 360 STTFLSPPSS PRSGVKDSLL EDPEDGKKKS GEAEARPVSY SYSFFHIIFA LASMYAAMLL 370 380 390 400 410 SGWTDSSESA TLIDVGWTSV WVKICTGWVT AVLYIWTLIA PLILPDREFY

References

[1]

"The Arabidopsis lyrata genome sequence and the basis of rapid genome size change." Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M., Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G., Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K., Spannagl M., Wang X. , Yang L., Nasrallah M.E., Bergelson J., Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y., Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L. Nat. Genet. 43:476-481(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. MN47.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GL348715 Genomic DNA. Translation: EFH58711.1.
RefSeq	XP_002882452.1. XM_002882406.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	9318519.
KEGG	aly:ARALYDRAFT_896727.
Family and domain databases
InterPro	IPR005016. TMS_TDE. [Graphical view]
PANTHER	PTHR10383. PTHR10383. 1 hit.
Pfam	PF03348. Serinc. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D7L4S9_ARALL

Accession

Primary (citable) accession number: D7L4S9

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	January 9, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)