D7KZK9 (D7KZK9_ARALL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EFH60596.1

Gene names

ORF Names:

ARALYDRAFT_477518 EMBL EFH60596.1

Organism

Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress) [Complete proteome]

Taxonomic identifier

81972 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis › Arabidopsis lyrata

Protein attributes

Sequence length	484 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	histidyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular_component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro histidine-tRNA ligase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D7KZK9 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: DAF30EC467019B35	FASTA	484	54,966
	10 20 30 40 50 60 MHSLKQIKQW VEQILNLFNP EGRGFDSFLD KVKEIVESNE NRRLPKLPKG TRDFAKEQMA 70 80 90 100 110 120 VREKAFSIIQ NVFKRHGATA LDTPVFELRE TLMGKYGEDS KLVYDIADQG GELCSLRYDL 130 140 150 160 170 180 TVPFARYVAM NGITSFKRYQ IAKVYRRDNP SKGRYREFYQ CDFDIAGLFE PMGPDFEIVK 190 200 210 220 230 240 ILTELLDELE IGDYEVKLNH RKLLDGMLEI CGVPPEKFRT ICSSIDKLDK QSFEQVKKEM 250 260 270 280 290 300 VEEKGLSSEI ADRIGNFVKE KGAPLELLSK LRQEGSEFLD NQSSREALDE LSIMFEALER 310 320 330 340 350 360 SKCSHRIVFD LSLARGLDYY TGVIFEAVCI GAEVGSIGAG GRYDNLIGMF GTKQVPAVGM 370 380 390 400 410 420 SLGIERVFNI MEELNEKQKQ VIRPTETQVL VSIMVDNKLA EAAGLVSQLW DAKINAEYLV 430 440 450 460 470 480 SKRKEKHFNR AKESGIPWMV MVGEKELSGG FVTLKKLEKG SEEKEDQTCS RDSFVGELLK LLSC

References

[1]

"The Arabidopsis lyrata genome sequence and the basis of rapid genome size change." Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M., Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G., Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K., Spannagl M., Wang X. , Yang L., Nasrallah M.E., Bergelson J., Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y., Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L. Nat. Genet. 43:476-481(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. MN47.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GL348715 Genomic DNA. Translation: EFH60596.1.
RefSeq	XP_002884337.1. XM_002884291.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	9320403.
KEGG	aly:ARALYDRAFT_477518.
Phylogenomic databases
KO	K01892.
Family and domain databases
Gene3D	3.40.50.800. 1 hit.
HAMAP	MF_00127. His_tRNA_synth.
InterPro	IPR006195. aa-tRNA-synth_II. IPR004154. Anticodon-bd. IPR015807. His-tRNA-ligase. IPR004516. HisRS/HisZ. [Graphical view]
PANTHER	PTHR11476. PTHR11476. 1 hit.
Pfam	PF03129. HGTP_anticodon. 1 hit. [Graphical view]
PIRSF	PIRSF001549. His-tRNA_synth. 1 hit.
SUPFAM	SSF52954. Anticodon_bd. 1 hit.
TIGRFAMs	TIGR00442. hisS. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D7KZK9_ARALL

Accession

Primary (citable) accession number: D7KZK9

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	March 6, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)