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Protein

Glutamate decarboxylase

Gene

ARALYDRAFT_894224

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
ORF Names:ARALYDRAFT_894224Imported
OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
Taxonomic identifieri81972 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000008694 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi59689.scaffold_201298.1.

Structurei

3D structure databases

ProteinModelPortaliD7KT30.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

D7KT30-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLTKTATND ESVCTMFGSR YVRTTLPKYE IGENSMPKDA AYQIIKDELM
60 70 80 90 100
LDGNPRLNLA SFVTTWMEPE CDKLIMDSIN KNYVDMDEYP VTTEFQNRCV
110 120 130 140 150
NIIARLFNAP LKESETAVGV GTVGSSEAIM LAGLAFKRKW QNRRKAEGKP
160 170 180 190 200
YDKPNIVTGA NVQVCWEKFA RYFEVELKEV KLSEGYYVMD PDKAAEMVDE
210 220 230 240 250
NTICVAAILG STLNGEFEDV KRLNDLLVKK NEETGWNTPI HVDAASGGFI
260 270 280 290 300
APFIYPELEW DFRLPLVKSI NVSGHKYGLV YAGIGWVVWR ASEDLPEELI
310 320 330 340 350
FHINYLGSDQ PTFTLNFSKG SSQIIAQYYQ LIRLGFEGYK NVMENCIENM
360 370 380 390 400
VILKEGIEKT ERFNIVSKDQ GVPVVAFSLK DHSFHNEFEI SEMLRRFGWI
410 420 430 440 450
VPAYTMPADA QHITVLRVVI REDFSRTLAE RLVVDIVKVL HELDTLPSKI
460 470 480 490
SKKMGIEGIA ANVKEKKMER EALMEVIVGW RKFVKDRKKM NGVC
Length:494
Mass (Da):56,234
Last modified:August 10, 2010 - v1
Checksum:iBA73701721C0DDFF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL348714 Genomic DNA. Translation: EFH63255.1.
RefSeqiXP_002886996.1. XM_002886950.1.

Genome annotation databases

EnsemblPlantsiscaffold_201298.1; scaffold_201298.1; scaffold_201298.1.
GeneIDi9324534.
KEGGialy:ARALYDRAFT_894224.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL348714 Genomic DNA. Translation: EFH63255.1.
RefSeqiXP_002886996.1. XM_002886950.1.

3D structure databases

ProteinModelPortaliD7KT30.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi59689.scaffold_201298.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiscaffold_201298.1; scaffold_201298.1; scaffold_201298.1.
GeneIDi9324534.
KEGGialy:ARALYDRAFT_894224.

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. MN47Imported.

Entry informationi

Entry nameiD7KT30_ARALL
AccessioniPrimary (citable) accession number: D7KT30
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: June 24, 2015
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.