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D7KHZ2 (D7KHZ2_ARALL) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length793 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
D7KHZ2 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: ACE39A227700F6BD

FASTA79388,040
        10         20         30         40         50         60 
MLAIRSSNYL RCLPSLCTKT QISQFSSVLL SFSRQVSHLR LSSCHRAMSS SRPSAFDALM 

        70         80         90        100        110        120 
SNARAAAKKK TPQTTTSSRS PNKRKIGETQ DANLGKTLVS EGTLPKTEDP VEPISDSAKP 

       130        140        150        160        170        180 
RSDTSSIAED SKTGTKKART LSKTDKIDEM KSKIGLLKKK PNDFDPEKVS CWEKGERVPF 

       190        200        210        220        230        240 
LFLALAFDLI SNESGRIVIT DILCNMLRTV IATTPEDLVA TVYLAANEIA PAHEGVELGI 

       250        260        270        280        290        300 
GEGTIIKAIS EAFGRTEDHV KKQNTELGDL GLVAKGSRST QTMMFKPEPL TVVKVFDTFR 

       310        320        330        340        350        360 
QIAKESGKDS NEKKKNRMKA LLVATTDCEP LYLTRLLQAK LRLGFSGQTV LAALGQAAVY 

       370        380        390        400        410        420 
NEEHSKPPPN TKSPLEEAAK IVKQVFTVLP VYDIIVPALL TGGVWNLPKT CNFTLGVPIG 

       430        440        450        460        470        480 
PMLAKPTKGV AEILNKFQDI VFTCEYKYDG ERAQIHFLED GTFEIYSRNA ERNTGKYPDV 

       490        500        510        520        530        540 
ALALSRLKKP SVKSFILDCE VVAFDREKKK ILPFQILSTR ARKNVNVNDI KVGVCIFAFD 

       550        560        570        580        590        600 
MLYLNGQQLI QENLNIRREK LYESFEEDPG YFQFATALTS SDIDEIQKFL DASVDVGCEG 

       610        620        630        640        650        660 
LIIKTLNSDA TYEPAKRSNN WLKLKKDYMD SIGDSMDLVP IAAFHGRGKR TGVYGAFLLA 

       670        680        690        700        710        720 
CYDVDKEEFQ SICKIGTGFS DAMLDERSSS LRSQVIATPK QYYRVGDSLN PDVWFEPTEV 

       730        740        750        760        770        780 
WEVKAADLTI SPVHRAATGI VDPDKGISLR FPRLLRVRED KKPEDATSSE QIADMYQAQK 

       790 
HNHPSNEVKG DDD 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GL348713 Genomic DNA. Translation: EFH68697.1.
RefSeqXP_002892438.1. XM_002892392.1.

3D structure databases

ProteinModelPortalD7KHZ2.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsscaffold_100834.1; scaffold_100834.1; scaffold_100834.1.
GeneID9328500.
KEGGaly:ARALYDRAFT_888040.

Phylogenomic databases

KOK10747.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD7KHZ2_ARALL
AccessionPrimary (citable) accession number: D7KHZ2
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: March 19, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)