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D7KB98

- D7KB98_ARALL

UniProt

D7KB98 - D7KB98_ARALL

Protein
Submitted name:

Putative uncharacterized protein

Gene

ARALYDRAFT_470218

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (10 Aug 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. sequence-specific DNA binding Source: EnsemblPlants/Gramene

    GO - Biological processi

    1. negative regulation of transcription, DNA-templated Source: EnsemblPlants/Gramene
    2. regulation of endosperm development Source: EnsemblPlants/Gramene
    3. regulation of gene expression by genetic imprinting Source: EnsemblPlants/Gramene
    4. response to absence of light Source: EnsemblPlants/Gramene
    5. seed morphogenesis Source: EnsemblPlants/Gramene

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    ORF Names:ARALYDRAFT_470218Imported
    OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
    Taxonomic identifieri81972 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000008694: Unassembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. PcG protein complex Source: InterPro

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 SET domain.UniRule annotation
    Contains SET domain.SAAS annotation

    Phylogenomic databases

    KOiK11430.

    Family and domain databases

    InterProiIPR026489. CXC_dom.
    IPR025778. Hist-Lys_N-MeTrfase_EZ.
    IPR001214. SET_dom.
    [Graphical view]
    PfamiPF00856. SET. 1 hit.
    [Graphical view]
    SMARTiSM00317. SET. 1 hit.
    [Graphical view]
    PROSITEiPS51633. CXC. 1 hit.
    PS51576. SAM_MT43_EZ. 1 hit.
    PS50280. SET. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D7KB98-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEKDNHEDDG EDLPPDINQI KEQIEEERFL HIKKTFELRC IPSVAAHASH    50
    HQSFDLNQPL AEDDNEGDNK TLLSRMQNPL HHFSALSDSD TYEDQGCVFN 100
    KEAPLFPSVN LPVVEQLPRS LTWVFIKRHL MAESDSVIGK RQIYYLNGEA 150
    LELSSEEDEE DEEEDEEEAK KEKCEFSKDV DRFIWTVGQD YGLDDLVVQR 200
    ALAKFLEVEV SDILERYNEL KLKNDETVGE ASDLTSKTIT TAFQDFADRR 250
    HCRRCLIFDC HMHEKFEPEF RPSEDKSGLF ENEDREPCSE HCYLKVRSVT 300
    EADHAVDNDN SISNKNVVSD PNTTMWTPVE KDLYLKGVQI FGRNSCAITL 350
    NILRGLKTCL EVYNYMLEQD QCTMSLVLHK TTKTKNQVNK KVSRKGTRSV 400
    RKKSRLRKYA RYPPALKKTT NGEAKFYKHY SPCTCKSKCG YQCPCLTNEN 450
    CCEKYCGCPK DCNNRFGGCN CAIGQCTNRQ CPCFAANREC DPDLCRSCPL 500
    SCGDGSLGEP SEQIQCKNMH FLLKKNKKIL IGKSNVHGWG AFTPDSLKKN 550
    EFLGEYTGEL ITHEEANERG RVEDRIGSSY LFTLNDQLEI DARRYGNKFK 600
    FLNHSARPNC YAKLMIVRGD QRIGLFAERA IEQNEELFFD YCYGPEHADW 650
    SRGREPRKTG ASKRSKEARP SR 672
    Length:672
    Mass (Da):77,246
    Last modified:August 10, 2010 - v1
    Checksum:i2EEC36CB426AC74D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL348713 Genomic DNA. Translation: EFH65667.1.
    RefSeqiXP_002889408.1. XM_002889362.1.

    Genome annotation databases

    EnsemblPlantsifgenesh2_kg.1__172__AT1G02580.1; fgenesh2_kg.1__172__AT1G02580.1; fgenesh2_kg.1__172__AT1G02580.1.
    GeneIDi9325472.
    KEGGialy:ARALYDRAFT_470218.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL348713 Genomic DNA. Translation: EFH65667.1 .
    RefSeqi XP_002889408.1. XM_002889362.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi fgenesh2_kg.1__172__AT1G02580.1 ; fgenesh2_kg.1__172__AT1G02580.1 ; fgenesh2_kg.1__172__AT1G02580.1 .
    GeneIDi 9325472.
    KEGGi aly:ARALYDRAFT_470218.

    Phylogenomic databases

    KOi K11430.

    Family and domain databases

    InterProi IPR026489. CXC_dom.
    IPR025778. Hist-Lys_N-MeTrfase_EZ.
    IPR001214. SET_dom.
    [Graphical view ]
    Pfami PF00856. SET. 1 hit.
    [Graphical view ]
    SMARTi SM00317. SET. 1 hit.
    [Graphical view ]
    PROSITEi PS51633. CXC. 1 hit.
    PS51576. SAM_MT43_EZ. 1 hit.
    PS50280. SET. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. MN47Imported.

    Entry informationi

    Entry nameiD7KB98_ARALL
    AccessioniPrimary (citable) accession number: D7KB98
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 10, 2010
    Last sequence update: August 10, 2010
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3