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Protein
Submitted name:

Putative uncharacterized protein

Gene

ARALYDRAFT_470218

Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. chromatin binding Source: EnsemblPlants/Gramene
  2. histone-lysine N-methyltransferase activity Source: EnsemblPlants/Gramene
  3. sequence-specific DNA binding Source: EnsemblPlants/Gramene
  4. sequence-specific DNA binding transcription factor activity Source: EnsemblPlants/Gramene

GO - Biological processi

  1. negative regulation of transcription, DNA-templated Source: EnsemblPlants/Gramene
  2. regulation of endosperm development Source: EnsemblPlants/Gramene
  3. regulation of gene expression by genetic imprinting Source: EnsemblPlants/Gramene
  4. seed morphogenesis Source: EnsemblPlants/Gramene
  5. transcription, DNA-templated Source: EnsemblPlants/Gramene
  6. vernalization response Source: EnsemblPlants/Gramene
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:ARALYDRAFT_470218Imported
OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)Imported
Taxonomic identifieri81972 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000008694: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. PcG protein complex Source: EnsemblPlants/Gramene
Complete GO annotation...

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation

Phylogenomic databases

KOiK11430.

Family and domain databases

InterProiIPR026489. CXC_dom.
IPR025778. Hist-Lys_N-MeTrfase_EZ.
IPR001214. SET_dom.
[Graphical view]
PfamiPF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00317. SET. 1 hit.
[Graphical view]
PROSITEiPS51633. CXC. 1 hit.
PS51576. SAM_MT43_EZ. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D7KB98-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKDNHEDDG EDLPPDINQI KEQIEEERFL HIKKTFELRC IPSVAAHASH
60 70 80 90 100
HQSFDLNQPL AEDDNEGDNK TLLSRMQNPL HHFSALSDSD TYEDQGCVFN
110 120 130 140 150
KEAPLFPSVN LPVVEQLPRS LTWVFIKRHL MAESDSVIGK RQIYYLNGEA
160 170 180 190 200
LELSSEEDEE DEEEDEEEAK KEKCEFSKDV DRFIWTVGQD YGLDDLVVQR
210 220 230 240 250
ALAKFLEVEV SDILERYNEL KLKNDETVGE ASDLTSKTIT TAFQDFADRR
260 270 280 290 300
HCRRCLIFDC HMHEKFEPEF RPSEDKSGLF ENEDREPCSE HCYLKVRSVT
310 320 330 340 350
EADHAVDNDN SISNKNVVSD PNTTMWTPVE KDLYLKGVQI FGRNSCAITL
360 370 380 390 400
NILRGLKTCL EVYNYMLEQD QCTMSLVLHK TTKTKNQVNK KVSRKGTRSV
410 420 430 440 450
RKKSRLRKYA RYPPALKKTT NGEAKFYKHY SPCTCKSKCG YQCPCLTNEN
460 470 480 490 500
CCEKYCGCPK DCNNRFGGCN CAIGQCTNRQ CPCFAANREC DPDLCRSCPL
510 520 530 540 550
SCGDGSLGEP SEQIQCKNMH FLLKKNKKIL IGKSNVHGWG AFTPDSLKKN
560 570 580 590 600
EFLGEYTGEL ITHEEANERG RVEDRIGSSY LFTLNDQLEI DARRYGNKFK
610 620 630 640 650
FLNHSARPNC YAKLMIVRGD QRIGLFAERA IEQNEELFFD YCYGPEHADW
660 670
SRGREPRKTG ASKRSKEARP SR
Length:672
Mass (Da):77,246
Last modified:August 10, 2010 - v1
Checksum:i2EEC36CB426AC74D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL348713 Genomic DNA. Translation: EFH65667.1.
RefSeqiXP_002889408.1. XM_002889362.1.

Genome annotation databases

EnsemblPlantsifgenesh2_kg.1__172__AT1G02580.1; fgenesh2_kg.1__172__AT1G02580.1; fgenesh2_kg.1__172__AT1G02580.1.
GeneIDi9325472.
KEGGialy:ARALYDRAFT_470218.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL348713 Genomic DNA. Translation: EFH65667.1.
RefSeqiXP_002889408.1. XM_002889362.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsifgenesh2_kg.1__172__AT1G02580.1; fgenesh2_kg.1__172__AT1G02580.1; fgenesh2_kg.1__172__AT1G02580.1.
GeneIDi9325472.
KEGGialy:ARALYDRAFT_470218.

Phylogenomic databases

KOiK11430.

Family and domain databases

InterProiIPR026489. CXC_dom.
IPR025778. Hist-Lys_N-MeTrfase_EZ.
IPR001214. SET_dom.
[Graphical view]
PfamiPF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00317. SET. 1 hit.
[Graphical view]
PROSITEiPS51633. CXC. 1 hit.
PS51576. SAM_MT43_EZ. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. MN47Imported.

Entry informationi

Entry nameiD7KB98_ARALL
AccessioniPrimary (citable) accession number: D7KB98
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: March 4, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.