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D7KB98

- D7KB98_ARALL

UniProt

D7KB98 - D7KB98_ARALL

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Protein
Submitted name:

Putative uncharacterized protein

Gene
ARALYDRAFT_470218
Organism
Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. sequence-specific DNA binding Source: EnsemblPlants/Gramene

GO - Biological processi

  1. negative regulation of transcription, DNA-templated Source: EnsemblPlants/Gramene
  2. regulation of endosperm development Source: EnsemblPlants/Gramene
  3. regulation of gene expression by genetic imprinting Source: EnsemblPlants/Gramene
  4. response to absence of light Source: EnsemblPlants/Gramene
  5. seed morphogenesis Source: EnsemblPlants/Gramene
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:ARALYDRAFT_470218Imported
OrganismiArabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
Taxonomic identifieri81972 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000008694: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. PcG protein complex Source: InterPro
Complete GO annotation...

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation
Contains SET domain.SAAS annotations

Phylogenomic databases

KOiK11430.

Family and domain databases

InterProiIPR026489. CXC_dom.
IPR025778. Hist-Lys_N-MeTrfase_EZ.
IPR001214. SET_dom.
[Graphical view]
PfamiPF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00317. SET. 1 hit.
[Graphical view]
PROSITEiPS51633. CXC. 1 hit.
PS51576. SAM_MT43_EZ. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D7KB98-1 [UniParc]FASTAAdd to Basket

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MEKDNHEDDG EDLPPDINQI KEQIEEERFL HIKKTFELRC IPSVAAHASH    50
HQSFDLNQPL AEDDNEGDNK TLLSRMQNPL HHFSALSDSD TYEDQGCVFN 100
KEAPLFPSVN LPVVEQLPRS LTWVFIKRHL MAESDSVIGK RQIYYLNGEA 150
LELSSEEDEE DEEEDEEEAK KEKCEFSKDV DRFIWTVGQD YGLDDLVVQR 200
ALAKFLEVEV SDILERYNEL KLKNDETVGE ASDLTSKTIT TAFQDFADRR 250
HCRRCLIFDC HMHEKFEPEF RPSEDKSGLF ENEDREPCSE HCYLKVRSVT 300
EADHAVDNDN SISNKNVVSD PNTTMWTPVE KDLYLKGVQI FGRNSCAITL 350
NILRGLKTCL EVYNYMLEQD QCTMSLVLHK TTKTKNQVNK KVSRKGTRSV 400
RKKSRLRKYA RYPPALKKTT NGEAKFYKHY SPCTCKSKCG YQCPCLTNEN 450
CCEKYCGCPK DCNNRFGGCN CAIGQCTNRQ CPCFAANREC DPDLCRSCPL 500
SCGDGSLGEP SEQIQCKNMH FLLKKNKKIL IGKSNVHGWG AFTPDSLKKN 550
EFLGEYTGEL ITHEEANERG RVEDRIGSSY LFTLNDQLEI DARRYGNKFK 600
FLNHSARPNC YAKLMIVRGD QRIGLFAERA IEQNEELFFD YCYGPEHADW 650
SRGREPRKTG ASKRSKEARP SR 672
Length:672
Mass (Da):77,246
Last modified:August 10, 2010 - v1
Checksum:i2EEC36CB426AC74D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL348713 Genomic DNA. Translation: EFH65667.1.
RefSeqiXP_002889408.1. XM_002889362.1.

Genome annotation databases

EnsemblPlantsifgenesh2_kg.1__172__AT1G02580.1; fgenesh2_kg.1__172__AT1G02580.1; fgenesh2_kg.1__172__AT1G02580.1.
GeneIDi9325472.
KEGGialy:ARALYDRAFT_470218.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL348713 Genomic DNA. Translation: EFH65667.1 .
RefSeqi XP_002889408.1. XM_002889362.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi fgenesh2_kg.1__172__AT1G02580.1 ; fgenesh2_kg.1__172__AT1G02580.1 ; fgenesh2_kg.1__172__AT1G02580.1 .
GeneIDi 9325472.
KEGGi aly:ARALYDRAFT_470218.

Phylogenomic databases

KOi K11430.

Family and domain databases

InterProi IPR026489. CXC_dom.
IPR025778. Hist-Lys_N-MeTrfase_EZ.
IPR001214. SET_dom.
[Graphical view ]
Pfami PF00856. SET. 1 hit.
[Graphical view ]
SMARTi SM00317. SET. 1 hit.
[Graphical view ]
PROSITEi PS51633. CXC. 1 hit.
PS51576. SAM_MT43_EZ. 1 hit.
PS50280. SET. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. MN47.

Entry informationi

Entry nameiD7KB98_ARALL
AccessioniPrimary (citable) accession number: D7KB98
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: March 19, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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