Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

D7GM08 (D7GM08_HPV11) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names

L1 protein EMBL CBM41337.1

L1(A) EMBL AFC88076.1

Major capsid protein EMBL CBM41705.1

Mayor capsid protein EMBL CCC55747.1
Gene names
Name:L1 EMBL CBM41337.1
Synonyms:L1(A) EMBL AFC88076.1
OrganismHuman papillomavirus type 11 EMBL CBM41337.1
Taxonomic identifier10580 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stagePapillomaviridaeAlphapapillomavirus
Virus hostHomo sapiens (Human) [TaxID: 9606]

Protein attributes

Sequence length501 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D7GM08 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: 88957D023CC182A7

FASTA50155,835
        10         20         30         40         50         60 
MWRPSDSTVY VPPPNPVSKV VATDAYVKRT NIFYHASSSR LLAVGHPYYS IKKVNKTVVP 

        70         80         90        100        110        120 
KVSGYQYRVF KVVLPDPNKF ALPDSSLFDP TTQRLVWACT GLEVGRGQPL GVGVSGHPLL 

       130        140        150        160        170        180 
NKYDDVENSG GYGGNPGQDN RVNVGMDYKQ TQLCMVGCAP PLGEHWGKGT QCSNTSVQNG 

       190        200        210        220        230        240 
DCPPLELITS VIQDGDMVDT GFGAMNFADL QTNKSDVPLD ICGTVCKYPD YLQMAADPYG 

       250        260        270        280        290        300 
DRLFFYLRKE QMFARHFFNR AGTVGEPVPD DLLVKGGNNR SSVASSIYVH TPSGSLVSSE 

       310        320        330        340        350        360 
AQLFNKPYWL QKAQGHNNGI CWGNHLFVTV VDTTRSTNMT LCASVSKSAT YTNSDYKEYM 

       370        380        390        400        410        420 
RHVEEFDLQF IFQLCSITLS AEVMAYIHTM NPSVLEDWNF GLSPPPNGTL EDTYRYVQSQ 

       430        440        450        460        470        480 
AITCQKPTPE KEKQDPYKDM SFWEVNLKEK FSSELDQFPL GRKFLLQSGY RGRTSARTGI 

       490        500 
KRPAVSKPST APKRKRTKTK K 

« Hide

References

[1]"Virological failure of intralesional cidofovir therapy in recurrent respiratory papillomatosis is not associated with genetic or epigenetic changes of HPV11: Complete genome comparison of sequential isolates."
Gall T., Kis A., Feher E., Gergely L., Szarka K.
Antiviral Res. 0:0-0(2011)
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Prevaccination genomic diversity of human papillomavirus genotype 11: a study on 63 clinical isolates and 10 full-length genome sequences."
Maver P.J., Kocjan B.J., Seme K., Gale N., Potonik M., Poljak M.
J. Med. Virol. 83:461-470(2011)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: A101 EMBL CBM41741.1, A107 EMBL CBM41749.1, A128 EMBL CBM41743.1, A129 EMBL CBM41744.1, A136 EMBL CBM41745.1, A140 EMBL CBM41746.1, A171 EMBL CBM41748.1, A187 EMBL CBM41750.1, A197 EMBL CBM41751.1, A200 EMBL CBM41752.1, A201 EMBL CBM41753.1, A202 EMBL CBM41754.1, A205 EMBL CBM41755.1, A218 EMBL CBM41756.1, A250 EMBL CBM41757.1, A253 EMBL CBM41758.1, A260 EMBL CBM41759.1, A281 EMBL CBM41760.1, A297 EMBL CBM41761.1, A32 EMBL CBM41707.1, A320 EMBL CBM41762.1, A34 EMBL CBM41714.1, A345 EMBL CBM41763.1, A346 EMBL CBM41346.1, A35 EMBL CBM41715.1, A383 EMBL CBM41765.1, A409 EMBL CBM41766.1, A41 EMBL CBM41710.1, A418 EMBL CBM41767.1, A50 EMBL CBM41705.1, A51 EMBL CBM41708.1, A63 EMBL CBM41716.1, A86 EMBL CBM41337.1, A89 EMBL CBM41740.1, CAC11 EMBL CBM41726.1, CAC256 EMBL CBM41729.1, CAC266 EMBL CBM41730.1, CAC321 EMBL CBM41731.1, CAC336 EMBL CBM41732.1, CAC346 EMBL CBM41733.1, CAC86 EMBL CBM41727.1, CS123 EMBL CBM41738.1, CS20 EMBL CBM41735.1, CS58 EMBL CBM41736.1, CS93 EMBL CBM41737.1, LP1 EMBL CBM41718.1, LP12 EMBL CBM41720.1, LP14 EMBL CBM41722.1, LP16 EMBL CBM41723.1, LP19 EMBL CBM41724.1, LP27 EMBL CBM41725.1, LP6 EMBL CBM41719.1 and M3 EMBL CBM41712.1.
[3]"Complete genome analysis of human papillomavirus type 11 from recurrent respiratory papillomatoses with different aggressivity."
Gall T., Kis A., Feher E., Gergely L., Szarka K.
Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: JO-RRP_1 EMBL CCC55747.1, JO-RRP_3 EMBL CCC55765.1, JO-RRP_4 EMBL CCC55774.1 and JO-RRP_5 EMBL CCC55783.1.
[4]"Tumor progression of recurrent respiratory papillomatosis: duplications in the HPV-11 genome and selection of a successful chemotherapeutic agent."
Yuan H., Liu X., Wang J., Zhou D., Schlegel R.
Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: GUMC-AJ-Lung EMBL AFC88076.1.
[5]"Whole genome analysis of human papillomavirus genotype 11 from cervix, larynx and lung."
Chansaenroj J., Theamboonlers A., Junyangdikul P., Supiyaphan P., Poovorawan Y.
Asian Pac. J. Cancer Prev. 13:2619-2623(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CU16 EMBL AFF57210.1, CU17 EMBL AFF57219.1, CU18 EMBL AFF57228.1, CU19 EMBL AFF57237.1 and CU20 EMBL AFF57246.1.
[6]"Divergent human papillomavirus associated with recurrent respiratory papillomatosis with lung involvement."
Yuan H., Zhou D., Wang J., Schlegel R.
Genome Announc. 1:E00474-13(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: GUMC-AJ EMBL AFC88068.1.
[7]"Identical human papillomavirus (HPV) genomic variants persist in recurrent respiratory papillomatosis for up to 22 years."
Kocjan B.J., Gale N., Hocevar Boltezar I., Seme K., Fujs Komlos K., Hosnjak L., Maver P.J., Jelen M.M., Zupanic Pajnic I., Balazic J., Poljak M.
J. Infect. Dis. 207:583-587(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: LP1 EMBL CCE60479.1, LP126 EMBL CCE60452.1, LP133 EMBL CCE60434.1, LP138 EMBL CCE60398.1, LP14 EMBL CCE60506.1, LP146 EMBL CCE60461.1, LP16 EMBL CCE60488.1, LP170 EMBL CCE60533.1, LP174 EMBL CCJ09304.1, LP19 EMBL CCE60407.1, LP2 EMBL CCE60515.1, LP20 EMBL CCE60497.1, LP220 EMBL CCE60443.1, LP221 EMBL CCE60470.1, LP224f EMBL CCJ09569.1, LP229 EMBL CCE60542.1, LP253f EMBL CCJ09578.1, LP262f EMBL CCJ09560.1, LP27 EMBL CCE60524.1, LP6 EMBL CCE60416.1, LP8 EMBL CCE60425.1, LPX27 EMBL CCJ09322.1 and LPX35 EMBL CCJ09313.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
JN644141 Genomic DNA. Translation: AFC88068.1.
JN644142 Genomic DNA. Translation: AFC88076.1.
JQ773408 Genomic DNA. Translation: AFF57210.1.
JQ773409 Genomic DNA. Translation: AFF57219.1.
JQ773410 Genomic DNA. Translation: AFF57228.1.
JQ773411 Genomic DNA. Translation: AFF57237.1.
JQ773412 Genomic DNA. Translation: AFF57246.1.
FN870021 Genomic DNA. Translation: CBM41337.1.
FN870022 Genomic DNA. Translation: CBM41346.1.
FN870688 Genomic DNA. Translation: CBM41705.1.
FN870690 Genomic DNA. Translation: CBM41707.1.
FN870691 Genomic DNA. Translation: CBM41708.1.
FN870693 Genomic DNA. Translation: CBM41710.1.
FN870695 Genomic DNA. Translation: CBM41712.1.
FN870697 Genomic DNA. Translation: CBM41714.1.
FN870698 Genomic DNA. Translation: CBM41715.1.
FN870699 Genomic DNA. Translation: CBM41716.1.
FN870701 Genomic DNA. Translation: CBM41718.1.
FN870702 Genomic DNA. Translation: CBM41719.1.
FN870703 Genomic DNA. Translation: CBM41720.1.
FN870705 Genomic DNA. Translation: CBM41722.1.
FN870706 Genomic DNA. Translation: CBM41723.1.
FN870707 Genomic DNA. Translation: CBM41724.1.
FN870708 Genomic DNA. Translation: CBM41725.1.
FN870709 Genomic DNA. Translation: CBM41726.1.
FN870710 Genomic DNA. Translation: CBM41727.1.
FN870712 Genomic DNA. Translation: CBM41729.1.
FN870713 Genomic DNA. Translation: CBM41730.1.
FN870714 Genomic DNA. Translation: CBM41731.1.
FN870715 Genomic DNA. Translation: CBM41732.1.
FN870716 Genomic DNA. Translation: CBM41733.1.
FN870718 Genomic DNA. Translation: CBM41735.1.
FN870719 Genomic DNA. Translation: CBM41736.1.
FN870720 Genomic DNA. Translation: CBM41737.1.
FN870721 Genomic DNA. Translation: CBM41738.1.
FN870722 Genomic DNA. Translation: CBM41739.1.
FN870723 Genomic DNA. Translation: CBM41740.1.
FN870724 Genomic DNA. Translation: CBM41741.1.
FN870726 Genomic DNA. Translation: CBM41743.1.
FN870727 Genomic DNA. Translation: CBM41744.1.
FN870728 Genomic DNA. Translation: CBM41745.1.
FN870729 Genomic DNA. Translation: CBM41746.1.
FN870731 Genomic DNA. Translation: CBM41748.1.
FN870732 Genomic DNA. Translation: CBM41749.1.
FN870733 Genomic DNA. Translation: CBM41750.1.
FN870734 Genomic DNA. Translation: CBM41751.1.
FN870735 Genomic DNA. Translation: CBM41752.1.
FN870736 Genomic DNA. Translation: CBM41753.1.
FN870737 Genomic DNA. Translation: CBM41754.1.
FN870738 Genomic DNA. Translation: CBM41755.1.
FN870739 Genomic DNA. Translation: CBM41756.1.
FN870740 Genomic DNA. Translation: CBM41757.1.
FN870741 Genomic DNA. Translation: CBM41758.1.
FN870742 Genomic DNA. Translation: CBM41759.1.
FN870743 Genomic DNA. Translation: CBM41760.1.
FN870744 Genomic DNA. Translation: CBM41761.1.
FN870745 Genomic DNA. Translation: CBM41762.1.
FN870746 Genomic DNA. Translation: CBM41763.1.
FN870747 Genomic DNA. Translation: CBM41764.1.
FN870748 Genomic DNA. Translation: CBM41765.1.
FN870749 Genomic DNA. Translation: CBM41766.1.
FN870750 Genomic DNA. Translation: CBM41767.1.
FN907957 Genomic DNA. Translation: CBM41975.1.
FN907958 Genomic DNA. Translation: CBM41984.1.
FN907962 Genomic DNA. Translation: CBM42020.1.
FN907963 Genomic DNA. Translation: CBM42029.1.
FR872717 Genomic DNA. Translation: CCB84764.1.
HE574701 Genomic DNA. Translation: CCC55747.1.
HE574703 Genomic DNA. Translation: CCC55765.1.
HE574704 Genomic DNA. Translation: CCC55774.1.
HE574705 Genomic DNA. Translation: CCC55783.1.
HE611258 Genomic DNA. Translation: CCE60398.1.
HE611259 Genomic DNA. Translation: CCE60407.1.
HE611260 Genomic DNA. Translation: CCE60416.1.
HE611261 Genomic DNA. Translation: CCE60425.1.
HE611262 Genomic DNA. Translation: CCE60434.1.
HE611263 Genomic DNA. Translation: CCE60443.1.
HE611264 Genomic DNA. Translation: CCE60452.1.
HE611265 Genomic DNA. Translation: CCE60461.1.
HE611266 Genomic DNA. Translation: CCE60470.1.
HE611267 Genomic DNA. Translation: CCE60479.1.
HE611268 Genomic DNA. Translation: CCE60488.1.
HE611269 Genomic DNA. Translation: CCE60497.1.
HE611270 Genomic DNA. Translation: CCE60506.1.
HE611271 Genomic DNA. Translation: CCE60515.1.
HE611272 Genomic DNA. Translation: CCE60524.1.
HE611273 Genomic DNA. Translation: CCE60533.1.
HE611274 Genomic DNA. Translation: CCE60542.1.
HE962023 Genomic DNA. Translation: CCJ09304.1.
HE962024 Genomic DNA. Translation: CCJ09313.1.
HE962025 Genomic DNA. Translation: CCJ09322.1.
HE962365 Genomic DNA. Translation: CCJ09560.1.
HE962366 Genomic DNA. Translation: CCJ09569.1.
HE962367 Genomic DNA. Translation: CCJ09578.1.

3D structure databases

ProteinModelPortalD7GM08.
SMRD7GM08. Positions 20-470.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.175.20. 1 hit.
InterProIPR002210. Capsid_L1_Papillomavir.
IPR011222. dsDNA_vir_gr_I_capsid.
[Graphical view]
PfamPF00500. Late_protein_L1. 1 hit.
[Graphical view]
PRINTSPR00865. HPVCAPSIDL1.
SUPFAMSSF88648. SSF88648. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD7GM08_HPV11
AccessionPrimary (citable) accession number: D7GM08
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: February 19, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)