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D7GH26

- D7GH26_PROFC

UniProt

D7GH26 - D7GH26_PROFC

Protein

Glutamate decarboxylase

Gene

gadB

Organism
Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (10 Aug 2010)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciPFRE754252:GI1A-2387-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Name:gadBImported
    Ordered Locus Names:PFREUD_23230Imported
    OrganismiPropionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1)Imported
    Taxonomic identifieri754252 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPropionibacterineaePropionibacteriaceaePropionibacterium
    ProteomesiUP000000936: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000070228.
    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D7GH26-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNDPTRHPAY SIDRSQLGAV EINPVFARPA EATEFSKFRL PASESLPETA    50
    YQVVHDEAML DGNARLNLAT FVGTWMDDYA NRLYAESADK NMIDKDEYPK 100
    TAEIETRCWM MLADLWHAPD PDNTIGTSTI GSSEACMLGG LALKRRWQHA 150
    RKAAGKPTDH PNMVMSSAVQ VCWEKFCNYW DIEPRYVPIS EDHKVLDGAN 200
    LADYVDENTI GVVAIMGVTY TGMYEPVKQI AAALDEIQER TGLDVKIHVD 250
    AASGGMIAPF IQPDLEWDFR IERVASINTS GHKYGLVYPG LGWVVWRSVD 300
    DLPEDLIFKV SYLGGDMPTF ALNFSRPGAQ VLLQYYMFLR LGMDGFRRVQ 350
    ANSHDVAKFL SSQIGAMDDF ELWNDGSDIP VFAWRLKDRP NRKWDLYDLS 400
    ERLRTRGWLV PAYPMPADLT DVTVQRIVVR NGLSHDLADA FLESMRAEVA 450
    YLDALPAPMP SQHKQSGFHH 470
    Length:470
    Mass (Da):52,989
    Last modified:August 10, 2010 - v1
    Checksum:iE04DC3333C758069
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN806773 Genomic DNA. Translation: CBL57837.1.
    RefSeqiYP_003689239.1. NC_014215.1.

    Genome annotation databases

    EnsemblBacteriaiCBL57837; CBL57837; PFREUD_23230.
    GeneIDi9284303.
    KEGGipfr:PFREUD_23230.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN806773 Genomic DNA. Translation: CBL57837.1 .
    RefSeqi YP_003689239.1. NC_014215.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBL57837 ; CBL57837 ; PFREUD_23230 .
    GeneIDi 9284303.
    KEGGi pfr:PFREUD_23230.

    Phylogenomic databases

    HOGENOMi HOG000070228.
    KOi K01580.

    Enzyme and pathway databases

    BioCyci PFRE754252:GI1A-2387-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome of Propionibacterium freudenreichii CIRM-BIA1, a hardy actinobacterium with food and probiotic applications."
      Falentin H., Deutsch S.M., Jan G., Loux V., Thierry A., Parayre S., Maillard M.B., Dherbecourt J., Cousin F.J., Jardin J., Siguier P., Couloux A., Barbe V., Vacherie B., Wincker P., Gibrat J.F., Gaillardin C., Lortal S.
      PLoS ONE 5:E11748-E11748(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 9614 / CIP 103027 / CIRM-BIA1Imported.

    Entry informationi

    Entry nameiD7GH26_PROFC
    AccessioniPrimary (citable) accession number: D7GH26
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 10, 2010
    Last sequence update: August 10, 2010
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3