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D7GH26

- D7GH26_PROFC

UniProt

D7GH26 - D7GH26_PROFC

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Protein

Glutamate decarboxylase

Gene

gadB

Organism
Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

Note: Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciPFRE754252:GI1A-2387-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Name:gadBImported
Ordered Locus Names:PFREUD_23230Imported
OrganismiPropionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1)Imported
Taxonomic identifieri754252 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPropionibacterineaePropionibacteriaceaePropionibacterium
ProteomesiUP000000936: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000070228.
KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

D7GH26-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNDPTRHPAY SIDRSQLGAV EINPVFARPA EATEFSKFRL PASESLPETA
60 70 80 90 100
YQVVHDEAML DGNARLNLAT FVGTWMDDYA NRLYAESADK NMIDKDEYPK
110 120 130 140 150
TAEIETRCWM MLADLWHAPD PDNTIGTSTI GSSEACMLGG LALKRRWQHA
160 170 180 190 200
RKAAGKPTDH PNMVMSSAVQ VCWEKFCNYW DIEPRYVPIS EDHKVLDGAN
210 220 230 240 250
LADYVDENTI GVVAIMGVTY TGMYEPVKQI AAALDEIQER TGLDVKIHVD
260 270 280 290 300
AASGGMIAPF IQPDLEWDFR IERVASINTS GHKYGLVYPG LGWVVWRSVD
310 320 330 340 350
DLPEDLIFKV SYLGGDMPTF ALNFSRPGAQ VLLQYYMFLR LGMDGFRRVQ
360 370 380 390 400
ANSHDVAKFL SSQIGAMDDF ELWNDGSDIP VFAWRLKDRP NRKWDLYDLS
410 420 430 440 450
ERLRTRGWLV PAYPMPADLT DVTVQRIVVR NGLSHDLADA FLESMRAEVA
460 470
YLDALPAPMP SQHKQSGFHH
Length:470
Mass (Da):52,989
Last modified:August 10, 2010 - v1
Checksum:iE04DC3333C758069
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN806773 Genomic DNA. Translation: CBL57837.1.
RefSeqiYP_003689239.1. NC_014215.1.

Genome annotation databases

EnsemblBacteriaiCBL57837; CBL57837; PFREUD_23230.
GeneIDi9284303.
KEGGipfr:PFREUD_23230.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN806773 Genomic DNA. Translation: CBL57837.1 .
RefSeqi YP_003689239.1. NC_014215.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBL57837 ; CBL57837 ; PFREUD_23230 .
GeneIDi 9284303.
KEGGi pfr:PFREUD_23230.

Phylogenomic databases

HOGENOMi HOG000070228.
KOi K01580.

Enzyme and pathway databases

BioCyci PFRE754252:GI1A-2387-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The complete genome of Propionibacterium freudenreichii CIRM-BIA1, a hardy actinobacterium with food and probiotic applications."
    Falentin H., Deutsch S.M., Jan G., Loux V., Thierry A., Parayre S., Maillard M.B., Dherbecourt J., Cousin F.J., Jardin J., Siguier P., Couloux A., Barbe V., Vacherie B., Wincker P., Gibrat J.F., Gaillardin C., Lortal S.
    PLoS ONE 5:E11748-E11748(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 9614 / CIP 103027 / CIRM-BIA1Imported.

Entry informationi

Entry nameiD7GH26_PROFC
AccessioniPrimary (citable) accession number: D7GH26
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: November 26, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3