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D7GH26 (D7GH26_PROFC) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length470 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
D7GH26 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: E04DC3333C758069

FASTA47052,989
        10         20         30         40         50         60 
MNDPTRHPAY SIDRSQLGAV EINPVFARPA EATEFSKFRL PASESLPETA YQVVHDEAML 

        70         80         90        100        110        120 
DGNARLNLAT FVGTWMDDYA NRLYAESADK NMIDKDEYPK TAEIETRCWM MLADLWHAPD 

       130        140        150        160        170        180 
PDNTIGTSTI GSSEACMLGG LALKRRWQHA RKAAGKPTDH PNMVMSSAVQ VCWEKFCNYW 

       190        200        210        220        230        240 
DIEPRYVPIS EDHKVLDGAN LADYVDENTI GVVAIMGVTY TGMYEPVKQI AAALDEIQER 

       250        260        270        280        290        300 
TGLDVKIHVD AASGGMIAPF IQPDLEWDFR IERVASINTS GHKYGLVYPG LGWVVWRSVD 

       310        320        330        340        350        360 
DLPEDLIFKV SYLGGDMPTF ALNFSRPGAQ VLLQYYMFLR LGMDGFRRVQ ANSHDVAKFL 

       370        380        390        400        410        420 
SSQIGAMDDF ELWNDGSDIP VFAWRLKDRP NRKWDLYDLS ERLRTRGWLV PAYPMPADLT 

       430        440        450        460        470 
DVTVQRIVVR NGLSHDLADA FLESMRAEVA YLDALPAPMP SQHKQSGFHH

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References

[1]"The complete genome of Propionibacterium freudenreichii CIRM-BIA1, a hardy actinobacterium with food and probiotic applications."
Falentin H., Deutsch S.M., Jan G., Loux V., Thierry A., Parayre S., Maillard M.B., Dherbecourt J., Cousin F.J., Jardin J., Siguier P., Couloux A., Barbe V., Vacherie B., Wincker P., Gibrat J.F., Gaillardin C., Lortal S.
PLoS ONE 5:E11748-E11748(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 9614 / CIP 103027 / CIRM-BIA1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FN806773 Genomic DNA. Translation: CBL57837.1.
RefSeqYP_003689239.1. NC_014215.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBL57837; CBL57837; PFREUD_23230.
GeneID9284303.
KEGGpfr:PFREUD_23230.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000070228.
KOK01580.

Enzyme and pathway databases

BioCycPFRE754252:GI1A-1620-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD7GH26_PROFC
AccessionPrimary (citable) accession number: D7GH26
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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