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D7GDD8 (D7GDD8_PROFC) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length1261 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D7GDD8 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: 120AEC2F39926048

FASTA1,261139,559
        10         20         30         40         50         60 
MGTDKFGAND WLIADMRQRY LADPTSVDER WRAYFQALGV TPDPSTPVAS PAPVTPAPTQ 

        70         80         90        100        110        120 
APTPQAPTPQ APTSSAPGPN EPAQPPSSRV QAPVPTLEPR EIRRNAPEQP GMGGGLSADV 

       130        140        150        160        170        180 
PNPAVRPAKK AEGQATRTVL RGIPKTTAVN MNESLSVPTA TSVRQVPMKL VIDNRALVNS 

       190        200        210        220        230        240 
FMARTRGGKV SFTHIIAFAM VQAIRDVPEM NHSFDMTDGK PTLVENPAIN LGIAIDTTAK 

       250        260        270        280        290        300 
NGTRELLVPN IKDAGNLDFA QFWSAYEDLV DRTRSGKLTL EDYAGTTVSI TNPGGIGTNM 

       310        320        330        340        350        360 
SVPRLMSGQA MIMGVGSIDY PAAFQGTSTQ RTNDAAISKV CTLTSTYDHR IIQGAVSGEF 

       370        380        390        400        410        420 
LRRIHQLLLG ADGFYEHIYE ALRIPYPPLH WDRDFTANSQ SEISKGARVT ELIQAYRAEG 

       430        440        450        460        470        480 
HLLADLDPVE YRMRTHPDLD LATHGLSIWD LDREFPVGRF GGEEGRHIVL RQMLDILRES 

       490        500        510        520        530        540 
YCYTLAIEYM HIDDPEERAW VQERFERPRK PRPREEHLLI LDRLSEAEVF ETFLQTKYVG 

       550        560        570        580        590        600 
QTRFSMEGAE SSIVILSELC AAAADGGMAE VSIGMPHRGR LNVLTNVVGK LYSQVFREFD 

       610        620        630        640        650        660 
NKVPTEEDIT GDVKYHLGAT GQFTAMSGEK IKVSLAANPS HLEAVDPVLE GIARAKRDRQ 

       670        680        690        700        710        720 
PVPADYPVLP ILMHGDASFS AQGIVYEVLQ MSQLRPYRVG GTVHLVVNNQ LGFTTSPSDG 

       730        740        750        760        770        780 
RSSKYCTDVA KALGAPVIHV NGDDPDACAR AAELAFDFRA RFHKDVVIDM VCYRLRGHNE 

       790        800        810        820        830        840 
GDDPSFTQPQ MYDLVARKGS VRKIYTDALI GRGDISVEDA EQAVNRFRAR LEEVFSMVRN 

       850        860        870        880        890        900 
PEIPRDEVDH QVAYRLAPQY PAKERAASAP PTPTREQFER VADVYENLPE GFTPHPKVGP 

       910        920        930        940        950        960 
QLKRRADSIH NGPVDWATAE LLAFGTLLQD RRHVRLVGQD TRRGTFSQRF GAVVDRVTNE 

       970        980        990       1000       1010       1020 
AWVPLKHLSD DQAPFDIYDS NLTEYAGMGF EYGYSTAAPD ALVLWEAQYG DFANGAQTIA 

      1030       1040       1050       1060       1070       1080 
DEFISSGFAK WQQRSGVVLL LPHGYEGAGP DHSSCRIERW LQTADEGNIA VTMPSTAASY 

      1090       1100       1110       1120       1130       1140 
FHLLRQHAYV NWHRPLVVAT PKSMLRNKAA ASPLSDLLDE PWRPALADPT ITDPGAVRRV 

      1150       1160       1170       1180       1190       1200 
LLCAGKIRWD LVAERRKLGL DGQIAIVSLE RLFPLPTAEL AEILRAFPQV NDFRYVQEEP 

      1210       1220       1230       1240       1250       1260 
ENQGAWEFMD RFLTPALSEA LNRPFRMRPV TRPRSSAPSV GSHTVHLAQQ RSLLAESLGQ 


D 

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References

[1]"The complete genome of Propionibacterium freudenreichii CIRM-BIA1, a hardy actinobacterium with food and probiotic applications."
Falentin H., Deutsch S.M., Jan G., Loux V., Thierry A., Parayre S., Maillard M.B., Dherbecourt J., Cousin F.J., Jardin J., Siguier P., Couloux A., Barbe V., Vacherie B., Wincker P., Gibrat J.F., Gaillardin C., Lortal S.
PLoS ONE 5:E11748-E11748(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 9614 / CIP 103027 / CIRM-BIA1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN806773 Genomic DNA. Translation: CBL56549.1.
RefSeqYP_003687985.1. NC_014215.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBL56549; CBL56549; PFREUD_10250.
GeneID9284474.
KEGGpfr:PFREUD_10250.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000259587.
KOK00164.

Enzyme and pathway databases

BioCycPFRE754252:GI1A-1073-MONOMER.

Family and domain databases

Gene3D3.30.559.10. 1 hit.
InterProIPR001078. 2-oxoacid_DH_actylTfrase.
IPR011603. 2oxoglutarate_DH_E1.
IPR023213. CAT-like_dom.
IPR001017. DH_E1.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERPTHR23152. PTHR23152. 1 hit.
PfamPF00198. 2-oxoacid_dh. 1 hit.
PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
TIGRFAMsTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD7GDD8_PROFC
AccessionPrimary (citable) accession number: D7GDD8
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: October 16, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)