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D7DYX5

- D7DYX5_NOSA0

UniProt

D7DYX5 - D7DYX5_NOSA0

Protein

50S ribosomal protein L23

Gene

rplW

Organism
Nostoc azollae (strain 0708) (Anabaena azollae (strain 0708))
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.UniRule annotation

    GO - Molecular functioni

    1. nucleotide binding Source: InterPro
    2. rRNA binding Source: UniProtKB-HAMAP
    3. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

    Keywords - Ligandi

    RNA-binding, rRNA-bindingUniRule annotation

    Enzyme and pathway databases

    BioCyciTAZO551115:GH0O-2576-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L23UniRule annotation
    Gene namesi
    Name:rplWUniRule annotation
    Synonyms:rpl23UniRule annotation
    Ordered Locus Names:Aazo_2561Imported
    OrganismiNostoc azollae (strain 0708) (Anabaena azollae (strain 0708))Imported
    Taxonomic identifieri551115 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaNostocalesNostocaceaeTrichormus
    ProteomesiUP000001511: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L23P family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000231366.
    KOiK02892.
    OMAiMEQNKYT.

    Family and domain databases

    Gene3Di3.30.70.330. 1 hit.
    HAMAPiMF_01369_B. Ribosomal_L23_B.
    InterProiIPR012677. Nucleotide-bd_a/b_plait.
    IPR012678. Ribosomal_L23/L15e_core_dom.
    IPR013025. Ribosomal_L25/23.
    [Graphical view]
    PfamiPF00276. Ribosomal_L23. 1 hit.
    [Graphical view]
    SUPFAMiSSF54189. SSF54189. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D7DYX5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPNFDPRNLA DLVHRPILTE KATILMEQNK YTFEVTPKSS KPEIKAAIED    50
    LFQVKVVKIN TALPPRKQRR VGKFIGYKPQ YKRAIVTVAP GDEDKIRKLL 100
    FPDV 104
    Length:104
    Mass (Da):11,960
    Last modified:August 10, 2010 - v1
    Checksum:i9BBABA6A6DCAB6D5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002059 Genomic DNA. Translation: ADI64454.1.
    RefSeqiYP_003721577.1. NC_014248.1.

    Genome annotation databases

    EnsemblBacteriaiADI64454; ADI64454; Aazo_2561.
    GeneIDi9340360.
    KEGGinaz:Aazo_2561.
    PATRICi38228189. VBINosAzo102301_3405.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002059 Genomic DNA. Translation: ADI64454.1 .
    RefSeqi YP_003721577.1. NC_014248.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADI64454 ; ADI64454 ; Aazo_2561 .
    GeneIDi 9340360.
    KEGGi naz:Aazo_2561.
    PATRICi 38228189. VBINosAzo102301_3405.

    Phylogenomic databases

    HOGENOMi HOG000231366.
    KOi K02892.
    OMAi MEQNKYT.

    Enzyme and pathway databases

    BioCyci TAZO551115:GH0O-2576-MONOMER.

    Family and domain databases

    Gene3Di 3.30.70.330. 1 hit.
    HAMAPi MF_01369_B. Ribosomal_L23_B.
    InterProi IPR012677. Nucleotide-bd_a/b_plait.
    IPR012678. Ribosomal_L23/L15e_core_dom.
    IPR013025. Ribosomal_L25/23.
    [Graphical view ]
    Pfami PF00276. Ribosomal_L23. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54189. SSF54189. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome erosion in a nitrogen-fixing vertically transmitted endosymbiotic multicellular cyanobacterium."
      Ran L., Larsson J., Vigil-Stenman T., Nylander J.A., Ininbergs K., Zheng W.W., Lapidus A., Lowry S., Haselkorn R., Bergman B.
      PLoS ONE 5:E11486-E11486(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 0708Imported.

    Entry informationi

    Entry nameiD7DYX5_NOSA0
    AccessioniPrimary (citable) accession number: D7DYX5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 10, 2010
    Last sequence update: August 10, 2010
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3