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D7DQ55 (D7DQ55_METS0) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length358 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188 HAMAP-Rule MF_01201

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site341Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2511Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1301Substrate By similarity HAMAP-Rule MF_01201
Binding site2991Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue341N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
D7DQ55 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: 856B39B47040417A

FASTA35838,954
        10         20         30         40         50         60 
MSRPAIAHIR LDAFRHNYRV AKQAHAGKAL AVIKANAYGH GAVHCAKAIE GEADGFAVAC 

        70         80         90        100        110        120 
LEEALQLREA GIPEPILLLE GFFEAIELPE IVANDLWIVV HAQWQVEILF AAKLAKPLHV 

       130        140        150        160        170        180 
WLKMDSGMHR VGLPPDEYVQ AYERLKNHKN VGKIVLMTHF ANADNVSSNH TLQQIETFQN 

       190        200        210        220        230        240 
TTQGLSAEIS LANSAAILGW KQAKCDWTRP GIMLYGADPL MKADAKLKPV MQLTSKIISI 

       250        260        270        280        290        300 
SNVKQGESIG YGSIFTAERD TVVGVVACGY ADGYPRSAVT GTPIAVDGKM TRLIGRVSMD 

       310        320        330        340        350 
MLFVDLTDIP NATIGSQVEL WGNQVSANAV ATSAGTIAYE LFCNVKRAHF QYFDAANI 

« Hide

References

[1]"Complete sequence of Methylotenera sp. 301."
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Clum A., Land M., Hauser L., Kyrpides N., Ivanova N., Chistoservova L., Kalyuzhnaya M., Woyke T.
Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 301.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002056 Genomic DNA. Translation: ADI29426.1.
RefSeqYP_003674003.1. NC_014207.1.

3D structure databases

ProteinModelPortalD7DQ55.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADI29426; ADI29426; M301_1042.
GeneID9396223.
KEGGmeh:M301_1042.
PATRIC38198451. VBIMetSp140979_1060.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.
OMASVELWGD.

Enzyme and pathway databases

BioCycMVER666681:GHRP-1074-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD7DQ55_METS0
AccessionPrimary (citable) accession number: D7DQ55
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: April 16, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)