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D7DQ55

- D7DQ55_METV0

UniProt

D7DQ55 - D7DQ55_METV0

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Protein

Alanine racemase

Gene

M301_1042

Organism
Methylotenera versatilis (strain 301)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotationSAAS annotation

Cofactori

Pyridoxal phosphate.UniRule annotationSAAS annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei34 – 341Proton acceptor; specific for D-alanineUniRule annotation
Binding sitei130 – 1301SubstrateUniRule annotation
Active sitei251 – 2511Proton acceptor; specific for L-alanineUniRule annotation
Binding sitei299 – 2991Substrate; via amide nitrogenUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciMVER666681:GHRP-1074-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:M301_1042Imported
OrganismiMethylotenera versatilis (strain 301)Imported
Taxonomic identifieri666681 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaMethylophilalesMethylophilaceaeMethylotenera
ProteomesiUP000000383: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei34 – 341N6-(pyridoxal phosphate)lysineUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliD7DQ55.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the alanine racemase family.UniRule annotation

Phylogenomic databases

KOiK01775.
OMAiNITIISM.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.
PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D7DQ55-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSRPAIAHIR LDAFRHNYRV AKQAHAGKAL AVIKANAYGH GAVHCAKAIE
60 70 80 90 100
GEADGFAVAC LEEALQLREA GIPEPILLLE GFFEAIELPE IVANDLWIVV
110 120 130 140 150
HAQWQVEILF AAKLAKPLHV WLKMDSGMHR VGLPPDEYVQ AYERLKNHKN
160 170 180 190 200
VGKIVLMTHF ANADNVSSNH TLQQIETFQN TTQGLSAEIS LANSAAILGW
210 220 230 240 250
KQAKCDWTRP GIMLYGADPL MKADAKLKPV MQLTSKIISI SNVKQGESIG
260 270 280 290 300
YGSIFTAERD TVVGVVACGY ADGYPRSAVT GTPIAVDGKM TRLIGRVSMD
310 320 330 340 350
MLFVDLTDIP NATIGSQVEL WGNQVSANAV ATSAGTIAYE LFCNVKRAHF

QYFDAANI
Length:358
Mass (Da):38,954
Last modified:August 10, 2010 - v1
Checksum:i856B39B47040417A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002056 Genomic DNA. Translation: ADI29426.1.
RefSeqiYP_003674003.1. NC_014207.1.

Genome annotation databases

EnsemblBacteriaiADI29426; ADI29426; M301_1042.
GeneIDi9396223.
KEGGimeh:M301_1042.
PATRICi38198451. VBIMetSp140979_1060.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002056 Genomic DNA. Translation: ADI29426.1 .
RefSeqi YP_003674003.1. NC_014207.1.

3D structure databases

ProteinModelPortali D7DQ55.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADI29426 ; ADI29426 ; M301_1042 .
GeneIDi 9396223.
KEGGi meh:M301_1042.
PATRICi 38198451. VBIMetSp140979_1060.

Phylogenomic databases

KOi K01775.
OMAi NITIISM.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci MVER666681:GHRP-1074-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Methylotenera sp. 301."
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Clum A., Land M., Hauser L., Kyrpides N., Ivanova N., Chistoservova L., Kalyuzhnaya M., Woyke T.
    Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 301Imported.

Entry informationi

Entry nameiD7DQ55_METV0
AccessioniPrimary (citable) accession number: D7DQ55
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: October 29, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3