D7DQ55 (D7DQ55_METS0) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Name:	alr
Ordered Locus Names:	M301_1042

Organism

Methylotenera sp. (strain 301) [Complete proteome] [HAMAP] EMBL ADI29426.1

Taxonomic identifier

666681 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Methylophilales › Methylophilaceae › Methylotenera › Methylotenera versatilis

Protein attributes

Sequence length	358 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS020622 RuleBase RU000608
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL ADI29426.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D7DQ55 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: 856B39B47040417A	FASTA	358	38,954
	10 20 30 40 50 60 MSRPAIAHIR LDAFRHNYRV AKQAHAGKAL AVIKANAYGH GAVHCAKAIE GEADGFAVAC 70 80 90 100 110 120 LEEALQLREA GIPEPILLLE GFFEAIELPE IVANDLWIVV HAQWQVEILF AAKLAKPLHV 130 140 150 160 170 180 WLKMDSGMHR VGLPPDEYVQ AYERLKNHKN VGKIVLMTHF ANADNVSSNH TLQQIETFQN 190 200 210 220 230 240 TTQGLSAEIS LANSAAILGW KQAKCDWTRP GIMLYGADPL MKADAKLKPV MQLTSKIISI 250 260 270 280 290 300 SNVKQGESIG YGSIFTAERD TVVGVVACGY ADGYPRSAVT GTPIAVDGKM TRLIGRVSMD 310 320 330 340 350 MLFVDLTDIP NATIGSQVEL WGNQVSANAV ATSAGTIAYE LFCNVKRAHF QYFDAANI

References

[1]

"Complete sequence of Methylotenera sp. 301." Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Clum A., Land M., Hauser L., Kyrpides N., Ivanova N., Chistoservova L., Kalyuzhnaya M., Woyke T. Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 301.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002056 Genomic DNA. Translation: ADI29426.1.
RefSeq	YP_003674003.1. NC_014207.1.
3D structure databases
ProteinModelPortal	D7DQ55.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADI29426; ADI29426; M301_1042.
GeneID	9396223.
KEGG	meh:M301_1042.
PATRIC	38198451. VBIMetSp140979_1060.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
OMA	WARPGIL.
Enzyme and pathway databases
BioCyc	MVER666681:GHRP-1074-MONOMER.
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D7DQ55_METS0

Accession

Primary (citable) accession number: D7DQ55

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)