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D7D2F9 (D7D2F9_GEOSC) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:GC56T3_2854 EMBL ADI27796.1
OrganismGeobacillus sp. (strain C56-T3) [Complete proteome] [HAMAP] EMBL ADI27796.1
Taxonomic identifier691437 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus

Protein attributes

Sequence length511 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ADI27796.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2424 Potential EMBL ADI27796.1
Chain25 – 511487 Potential EMBL ADI27796.1
PRO_5000608397

Sequences

Sequence LengthMass (Da)Tools
D7D2F9 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: 4DAF28AEB7043BAB

FASTA51159,859
        10         20         30         40         50         60 
MGNRLFMLLV LPFLLFYAWP VQAAEKEERT WQDEAIYFIM VDRFNNMDPT NDKGVNVNDP 

        70         80         90        100        110        120 
KGYFGGDLKG VTAKLDYIKE MGFTAIWLTP IFENMPGGYH GYWIKDFYRV DPHFGTLDDL 

       130        140        150        160        170        180 
KTLVKEAHKR HMKVILDFVA NHVGYNHPWL HDPTKKDWFH PKKEIFDWND QTQLENGWVY 

       190        200        210        220        230        240 
GLPDLAQENP EVKKYLIDAA KWWIKETDID GYRLDTVRHV PKSFWQEFAK EVKSVKKDFF 

       250        260        270        280        290        300 
LLGEVWSDDP CYIAEYGKYG IDGFVDYPLY GAVKQSLARR DASLRPLYDV WEYNKTFYDR 

       310        320        330        340        350        360 
PYLLGSFLDN HDTVRFTKLS IDNHNNPISR IKLAMTYLFT APGIPIMYYG TEIAMNGGED 

       370        380        390        400        410        420 
PDNRRLMDFR ADPEIIDYLK KIGPLRQQLS SLRRGDFTLL YEKDGMAVWK RQYEDETTVI 

       430        440        450        460        470        480 
AINNTGETQH VHLTNDQLPK NKELRGFLLD DLVRGDGDGY DLVLDRETAE VYKLREKTGI 

       490        500        510 
NVPFIAAIVS VYVLFLLFLY LVKKRAKRMP E 

« Hide

References

[1]"Complete sequence of Geobacillus sp. C56-T3."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Mikhailova N., Kourtz L., Brumm P., Mead D., Woyke T.
Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C56-T3 EMBL ADI27796.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002050 Genomic DNA. Translation: ADI27796.1.
RefSeqYP_003672373.1. NC_014206.1.

3D structure databases

ProteinModelPortalD7D2F9.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADI27796; ADI27796; GC56T3_2854.
GeneID9237952.
KEGGgct:GC56T3_2854.
PATRIC38172932. VBIGeoSp154431_3101.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000085496.
KOK01176.

Enzyme and pathway databases

BioCycGSP691437:GI2V-2946-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD7D2F9_GEOSC
AccessionPrimary (citable) accession number: D7D2F9
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: October 16, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)