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D7D2F9

- D7D2F9_GEOSC

UniProt

D7D2F9 - D7D2F9_GEOSC

Protein
Submitted name:

Alpha amylase catalytic region

Gene

GC56T3_2854

Organism
Geobacillus sp. (strain C56-T3)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (10 Aug 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciGSP691437:GI2V-2946-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase catalytic regionImported
    Gene namesi
    Ordered Locus Names:GC56T3_2854Imported
    OrganismiGeobacillus sp. (strain C56-T3)Imported
    Taxonomic identifieri691437 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus
    ProteomesiUP000000380: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2424 PotentialImportedAdd
    BLAST
    Chaini25 – 511487 PotentialImportedPRO_5000608397Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliD7D2F9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    HOGENOMiHOG000085496.
    KOiK01176.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    D7D2F9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGNRLFMLLV LPFLLFYAWP VQAAEKEERT WQDEAIYFIM VDRFNNMDPT    50
    NDKGVNVNDP KGYFGGDLKG VTAKLDYIKE MGFTAIWLTP IFENMPGGYH 100
    GYWIKDFYRV DPHFGTLDDL KTLVKEAHKR HMKVILDFVA NHVGYNHPWL 150
    HDPTKKDWFH PKKEIFDWND QTQLENGWVY GLPDLAQENP EVKKYLIDAA 200
    KWWIKETDID GYRLDTVRHV PKSFWQEFAK EVKSVKKDFF LLGEVWSDDP 250
    CYIAEYGKYG IDGFVDYPLY GAVKQSLARR DASLRPLYDV WEYNKTFYDR 300
    PYLLGSFLDN HDTVRFTKLS IDNHNNPISR IKLAMTYLFT APGIPIMYYG 350
    TEIAMNGGED PDNRRLMDFR ADPEIIDYLK KIGPLRQQLS SLRRGDFTLL 400
    YEKDGMAVWK RQYEDETTVI AINNTGETQH VHLTNDQLPK NKELRGFLLD 450
    DLVRGDGDGY DLVLDRETAE VYKLREKTGI NVPFIAAIVS VYVLFLLFLY 500
    LVKKRAKRMP E 511
    Length:511
    Mass (Da):59,859
    Last modified:August 10, 2010 - v1
    Checksum:i4DAF28AEB7043BAB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002050 Genomic DNA. Translation: ADI27796.1.
    RefSeqiWP_013146184.1. NC_014206.1.
    YP_003672373.1. NC_014206.1.

    Genome annotation databases

    EnsemblBacteriaiADI27796; ADI27796; GC56T3_2854.
    GeneIDi9237952.
    KEGGigct:GC56T3_2854.
    PATRICi38172932. VBIGeoSp154431_3101.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002050 Genomic DNA. Translation: ADI27796.1 .
    RefSeqi WP_013146184.1. NC_014206.1.
    YP_003672373.1. NC_014206.1.

    3D structure databases

    ProteinModelPortali D7D2F9.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADI27796 ; ADI27796 ; GC56T3_2854 .
    GeneIDi 9237952.
    KEGGi gct:GC56T3_2854.
    PATRICi 38172932. VBIGeoSp154431_3101.

    Phylogenomic databases

    HOGENOMi HOG000085496.
    KOi K01176.

    Enzyme and pathway databases

    BioCyci GSP691437:GI2V-2946-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Geobacillus sp. C56-T3."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Mikhailova N., Kourtz L., Brumm P., Mead D., Woyke T.
      Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C56-T3Imported.

    Entry informationi

    Entry nameiD7D2F9_GEOSC
    AccessioniPrimary (citable) accession number: D7D2F9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 10, 2010
    Last sequence update: August 10, 2010
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3