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Protein
Submitted name:

Isocitrate dehydrogenase

Gene

Trad_1633

Organism
Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciTRAD649638:GH4M-1659-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Isocitrate dehydrogenaseImported (EC:1.1.1.42Imported)
Gene namesi
Ordered Locus Names:Trad_1633Imported
OrganismiTruepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24)Imported
Taxonomic identifieri649638 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesTrueperaceaeTruepera
ProteomesiUP000000379 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi649638.Trad_1633.

Structurei

3D structure databases

ProteinModelPortaliD7CYB3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the isocitrate and isopropylmalate dehydrogenases family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000021113.
KOiK00031.
OMAiRGIKVWP.

Family and domain databases

Gene3Di3.40.718.10. 1 hit.
InterProiIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR014273. Isocitrate_DH_aproteobac-typ.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERiPTHR11835. PTHR11835. 1 hit.
PfamiPF00180. Iso_dh. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02924. ICDH_alpha. 1 hit.
PROSITEiPS00470. IDH_IMDH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D7CYB3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVQKLSEAPA AGTKTAITVA YGDGIGPEIM TATLRILEAA GAQIEPHVIE
60 70 80 90 100
IGERVYARGH TAGIEPSAWD SLRSTKVFLK APITTPQGGG FKSLNVTIRK
110 120 130 140 150
GLGLYANVRP CRSYSPFVAT KHPVMDVVIV RENEEDLYAG IEHRQTDEVY
160 170 180 190 200
QCLKLISRPG TEKVVRYAFE YAKANGRKKV TCFTKDNIMK LTDGLFHKVF
210 220 230 240 250
EEVAADYPDI ENEHWIVDIG AAKLADTPEA FDVVVLPNLY GDILSDVAAQ
260 270 280 290 300
IAGSVGLAGS ANIGEHGAMF EAIHGSAPRR AGQDVANPSG LLLGAVMMLV
310 320 330 340 350
HIGQGDVAER VHNAWLRTLE DGVHTYDIFK EGVSRERVGT SAFADAVIAR
360 370 380 390 400
LGEVPERLER VSYAAREPFA LPQPAARPEA EKRLVGVDVF VAWRDAERNP
410 420 430 440 450
EVLAERLRSA AGEVPLAMIT NRGVKVWPEG LPETFCTDHW RCRFLVPEGQ
460 470 480 490
TLTHQTVASL LGRLADEGLD FIKTEHLYTF DGEPGYSLGQ GQ
Length:492
Mass (Da):53,662
Last modified:August 10, 2010 - v1
Checksum:i9CCFEBE0DF557719
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002049 Genomic DNA. Translation: ADI14752.1.
RefSeqiWP_013178120.1. NC_014221.1.
YP_003705295.1. NC_014221.1.

Genome annotation databases

EnsemblBacteriaiADI14752; ADI14752; Trad_1633.
KEGGitra:Trad_1633.
PATRICi38300410. VBITruRad72214_1607.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002049 Genomic DNA. Translation: ADI14752.1.
RefSeqiWP_013178120.1. NC_014221.1.
YP_003705295.1. NC_014221.1.

3D structure databases

ProteinModelPortaliD7CYB3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi649638.Trad_1633.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADI14752; ADI14752; Trad_1633.
KEGGitra:Trad_1633.
PATRICi38300410. VBITruRad72214_1607.

Phylogenomic databases

HOGENOMiHOG000021113.
KOiK00031.
OMAiRGIKVWP.

Enzyme and pathway databases

BioCyciTRAD649638:GH4M-1659-MONOMER.

Family and domain databases

Gene3Di3.40.718.10. 1 hit.
InterProiIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR014273. Isocitrate_DH_aproteobac-typ.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERiPTHR11835. PTHR11835. 1 hit.
PfamiPF00180. Iso_dh. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02924. ICDH_alpha. 1 hit.
PROSITEiPS00470. IDH_IMDH. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 17093 / CIP 108686 / LMG 22925 / RQ-24Imported.

Entry informationi

Entry nameiD7CYB3_TRURR
AccessioniPrimary (citable) accession number: D7CYB3
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: June 24, 2015
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.