D7CYB3 (D7CYB3_TRURR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Isocitrate dehydrogenase EMBL ADI14752.1
EC=1.1.1.42 EMBL ADI14752.1

Gene names

Ordered Locus Names:

Trad_1633

Organism

Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) [Complete proteome] [HAMAP]

Taxonomic identifier

649638 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Trueperaceae › Truepera › Truepera radiovictrix

Protein attributes

Sequence length	492 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the isocitrate and isopropylmalate dehydrogenases family. RuleBase RU004443

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU004444 EMBL ADI14752.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glyoxylate cycle Inferred from electronic annotation. Source: InterPro tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	NAD binding Inferred from electronic annotation. Source: InterPro isocitrate dehydrogenase (NADP+) activity Inferred from electronic annotation. Source: EC magnesium ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D7CYB3 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: 9CCFEBE0DF557719	FASTA	492	53,662
	10 20 30 40 50 60 MVQKLSEAPA AGTKTAITVA YGDGIGPEIM TATLRILEAA GAQIEPHVIE IGERVYARGH 70 80 90 100 110 120 TAGIEPSAWD SLRSTKVFLK APITTPQGGG FKSLNVTIRK GLGLYANVRP CRSYSPFVAT 130 140 150 160 170 180 KHPVMDVVIV RENEEDLYAG IEHRQTDEVY QCLKLISRPG TEKVVRYAFE YAKANGRKKV 190 200 210 220 230 240 TCFTKDNIMK LTDGLFHKVF EEVAADYPDI ENEHWIVDIG AAKLADTPEA FDVVVLPNLY 250 260 270 280 290 300 GDILSDVAAQ IAGSVGLAGS ANIGEHGAMF EAIHGSAPRR AGQDVANPSG LLLGAVMMLV 310 320 330 340 350 360 HIGQGDVAER VHNAWLRTLE DGVHTYDIFK EGVSRERVGT SAFADAVIAR LGEVPERLER 370 380 390 400 410 420 VSYAAREPFA LPQPAARPEA EKRLVGVDVF VAWRDAERNP EVLAERLRSA AGEVPLAMIT 430 440 450 460 470 480 NRGVKVWPEG LPETFCTDHW RCRFLVPEGQ TLTHQTVASL LGRLADEGLD FIKTEHLYTF 490 DGEPGYSLGQ GQ

References

[1]

"The complete genome of Truepera radiovictris DSM 17093." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ovchinnikova G., Munk A.C., Detter J.C., Han C., Tapia R., Land M., Hauser L. , Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Pomrenke H.G., Brambilla E., Klenk H.-P., Eisen J.A. Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 17093 / CIP 108686 / LMG 22925 / RQ-24.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002049 Genomic DNA. Translation: ADI14752.1.
RefSeq	YP_003705295.1. NC_014221.1.
3D structure databases
ProteinModelPortal	D7CYB3.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADI14752; ADI14752; Trad_1633.
GeneID	9280621.
KEGG	tra:Trad_1633.
PATRIC	38300410. VBITruRad72214_1607.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000021113.
KO	K00031.
Family and domain databases
Gene3D	3.40.718.10. 1 hit.
InterPro	IPR019818. IsoCit/isopropylmalate_DH_CS. IPR001804. Isocitrate/isopropylmalate_DH. IPR014273. Isocitrate_DH_aproteobac-typ. IPR024084. IsoPropMal-DH-like_dom. [Graphical view]
PANTHER	PTHR11835. PTHR11835. 1 hit.
Pfam	PF00180. Iso_dh. 1 hit. [Graphical view]
TIGRFAMs	TIGR02924. ICDH_alpha. 1 hit.
PROSITE	PS00470. IDH_IMDH. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D7CYB3_TRURR

Accession

Primary (citable) accession number: D7CYB3

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)