D7CXD9 (D7CXD9_TRURR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate aminotransferase EMBL ADI13263.1

Gene names

Ordered Locus Names:

Trad_0121

Organism

Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) [Complete proteome] [HAMAP]

Taxonomic identifier

649638 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Trueperaceae › Truepera › Truepera radiovictrix

Protein attributes

Sequence length	453 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL ADI13263.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D7CXD9 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: 1015731B59E59956	FASTA	453	47,671
	10 20 30 40 50 60 MGTIRLITEL PGPKSLELTR RREAATARGA AKLTPVAVAH AHGAAVTDVD GNTLLDFAGG 70 80 90 100 110 120 IGTLAVGHTP AGVVGALKAQ AEKLVHLCAI VGTYEPYVAL AELLCEIAPV SGPKKAVLLN 130 140 150 160 170 180 SGAEAVETAV KVARAHTGRA AVVVFEGAYH GRTNLTLAMT SKYGLFKKGF GPFAPEVYRL 190 200 210 220 230 240 PFPNLFRRPP GMSEAAFVEE AIRGLERAFV AHVDPSAVAA VVIEPVQGEG GFLPVPAPFL 250 260 270 280 290 300 RRLRELCTEH GMLLVADEIQ CGMGRTGKLF AVEHYGVEPD LVTVAKSLAA GMPLSAVVGR 310 320 330 340 350 360 AEVMDAPHPG GLGGTYSGNP LACVAALEAV AMIRDEAFLR RAREVGERLR GHLEGLQRAF 370 380 390 400 410 420 DAIGDVRGLG PMLALELVRE DGSPDPDAVQ RVTAEALKRG LIVLRAGLYS NCLRFLPPLN 430 440 450 LSDDELDEGM AVLREAFAAA FAPKEPQEVV SGD

References

[1]

"The complete genome of Truepera radiovictris DSM 17093." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ovchinnikova G., Munk A.C., Detter J.C., Han C., Tapia R., Land M., Hauser L. , Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Pomrenke H.G., Brambilla E., Klenk H.-P., Eisen J.A. Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 17093 / CIP 108686 / LMG 22925 / RQ-24.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002049 Genomic DNA. Translation: ADI13263.1.
RefSeq	YP_003703806.1. NC_014221.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADI13263; ADI13263; Trad_0121.
GeneID	9279090.
KEGG	tra:Trad_0121.
PATRIC	38297398. VBITruRad72214_0119.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000020206.
KO	K07250.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR004632. 4NH2But_aminotransferase_bac. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR00700. GABAtrnsam. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D7CXD9_TRURR

Accession

Primary (citable) accession number: D7CXD9

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)