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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

Trad_0121

Organism
Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 4-aminobutyrate transaminase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. gamma-aminobutyric acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciTRAD649638:GH4M-128-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported
Gene namesi
Ordered Locus Names:Trad_0121Imported
OrganismiTruepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24)Imported
Taxonomic identifieri649638 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesTrueperaceaeTruepera
ProteomesiUP000000379: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD7CXD9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000020206.
KOiK07250.
OMAiPEGNHYL.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D7CXD9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGTIRLITEL PGPKSLELTR RREAATARGA AKLTPVAVAH AHGAAVTDVD
60 70 80 90 100
GNTLLDFAGG IGTLAVGHTP AGVVGALKAQ AEKLVHLCAI VGTYEPYVAL
110 120 130 140 150
AELLCEIAPV SGPKKAVLLN SGAEAVETAV KVARAHTGRA AVVVFEGAYH
160 170 180 190 200
GRTNLTLAMT SKYGLFKKGF GPFAPEVYRL PFPNLFRRPP GMSEAAFVEE
210 220 230 240 250
AIRGLERAFV AHVDPSAVAA VVIEPVQGEG GFLPVPAPFL RRLRELCTEH
260 270 280 290 300
GMLLVADEIQ CGMGRTGKLF AVEHYGVEPD LVTVAKSLAA GMPLSAVVGR
310 320 330 340 350
AEVMDAPHPG GLGGTYSGNP LACVAALEAV AMIRDEAFLR RAREVGERLR
360 370 380 390 400
GHLEGLQRAF DAIGDVRGLG PMLALELVRE DGSPDPDAVQ RVTAEALKRG
410 420 430 440 450
LIVLRAGLYS NCLRFLPPLN LSDDELDEGM AVLREAFAAA FAPKEPQEVV

SGD
Length:453
Mass (Da):47,671
Last modified:August 10, 2010 - v1
Checksum:i1015731B59E59956
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002049 Genomic DNA. Translation: ADI13263.1.
RefSeqiWP_013176643.1. NC_014221.1.
YP_003703806.1. NC_014221.1.

Genome annotation databases

EnsemblBacteriaiADI13263; ADI13263; Trad_0121.
GeneIDi9279090.
KEGGitra:Trad_0121.
PATRICi38297398. VBITruRad72214_0119.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002049 Genomic DNA. Translation: ADI13263.1.
RefSeqiWP_013176643.1. NC_014221.1.
YP_003703806.1. NC_014221.1.

3D structure databases

ProteinModelPortaliD7CXD9.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADI13263; ADI13263; Trad_0121.
GeneIDi9279090.
KEGGitra:Trad_0121.
PATRICi38297398. VBITruRad72214_0119.

Phylogenomic databases

HOGENOMiHOG000020206.
KOiK07250.
OMAiPEGNHYL.

Enzyme and pathway databases

BioCyciTRAD649638:GH4M-128-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 17093 / CIP 108686 / LMG 22925 / RQ-24Imported.

Entry informationi

Entry nameiD7CXD9_TRURR
AccessioniPrimary (citable) accession number: D7CXD9
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: March 4, 2015
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.