Skip Header

Contribute Send feedback
Read comments (?) or add your own

D7CTM6 (D7CTM6_TRURR) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Catalytic domain of components of various dehydrogenase complexes EMBL ADI13883.1
Gene names
Ordered Locus Names:Trad_0748 EMBL ADI13883.1
OrganismTruepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) [Complete proteome] [HAMAP] EMBL ADI13883.1
Taxonomic identifier649638 [NCBI]
Taxonomic lineageBacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Trueperaceae › Truepera ›

Protein attributes

Sequence length478 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the 2-oxoacid dehydrogenase family. RuleBase RU003423

Contains 1 lipoyl-binding domain. RuleBase RU000447

Ontologies

Keywords
   DomainLipoyl SAAS SAAS003016 RuleBase RU000447
   Molecular functionAcyltransferase RuleBase RU003765
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functiontransferase activity, transferring acyl groups

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D7CTM6 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: 005A248B1EA69D4C

FASTA47850,610
        10         20         30         40         50         60 
MPRELVLPEL AESVVEGEIV KWLVAEGETV AQDQPVVEVM TDKVTVELPS PFAGTLEKHL 

        70         80         90        100        110        120 
VAEGAVVAVH DPIALFSDDA TGTQEAGATA EEAPKLEVAE APTADAPPVT PTGREPSVQA 

       130        140        150        160        170        180 
REERSIVEPS SGVGEDDGDA LSLFKADKDD PGAPVYQVRR GAAPQAAKAT GPYGRPLAVP 

       190        200        210        220        230        240 
AARKLARELG LELTAVAGSG PHGRIRVEDV RRAAEASAPA AAEPPSAPAP TPKAPAYKTP 

       250        260        270        280        290        300 
AGYEGLEERV PVRGLRRAIA NQMVASHLQT VRTLHVDEVD VTELVALRER LKPLAERRGV 

       310        320        330        340        350        360 
KLSYLPFIMK AAVAALKRFP VLNASFDEER GEIVLKRFYN LGLAVATDVG LVVPVVKDVD 

       370        380        390        400        410        420 
RKSVLEIAGE VSALAAKARE GKLAPEDVRG GTFSITNIGS LGGLFSFPII NVPEAAILGV 

       430        440        450        460        470 
HSIKKRPVVL PDDTIAARQM LYLSLSFDHR LVDGAEAAQF TSYVIELLGS PESLMLEG

« Hide

References

[1]"The complete genome of Truepera radiovictris DSM 17093."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ovchinnikova G., Munk A.C., Detter J.C., Han C., Tapia R., Land M., Hauser L. expand/collapse author list , Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Pomrenke H.G., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17093 / CIP 108686 / LMG 22925 / RQ-24.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002049 Genomic DNA. Translation: ADI13883.1.
RefSeqYP_003704426.1. NC_014221.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADI13883; ADI13883; Trad_0748.
GeneID9279727.
KEGGtra:Trad_0748.
PATRIC38298658. VBITruRad72214_0739.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000281564.
KOK00627.

Enzyme and pathway databases

BioCycTRAD649638:GH4M-765-MONOMER.

Family and domain databases

Gene3D3.30.559.10. 1 hit.
4.10.320.10. 1 hit.
InterProIPR003016. 2-oxoA_DH_lipoyl-BS.
IPR001078. 2-oxoacid_DH_actylTfrase.
IPR000089. Biotin_lipoyl.
IPR023213. CAT-like_dom.
IPR004167. E3-bd.
IPR011053. Single_hybrid_motif.
[Graphical view]
PfamPF00198. 2-oxoacid_dh. 1 hit.
PF00364. Biotin_lipoyl. 1 hit.
PF02817. E3_binding. 1 hit.
[Graphical view]
SUPFAMSSF47005. E3_bd. 1 hit.
SSF51230. Hybrid_motif. 1 hit.
PROSITEPS50968. BIOTINYL_LIPOYL. 1 hit.
PS00189. LIPOYL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD7CTM6_TRURR
AccessionPrimary (citable) accession number: D7CTM6
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: May 29, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info