D7CP25 (D7CP25_SYNLT) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 20.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: 6-phosphofructokinase HAMAP-Rule MF_00339 Short name=Phosphofructokinase HAMAP-Rule MF_00339 EC=2.7.1.11 HAMAP-Rule MF_00339 Alternative name(s): Phosphohexokinase HAMAP-Rule MF_00339 | ||||
| Gene names |
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| Organism | Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) [Complete proteome] [HAMAP] EMBL ADI02460.1 | ||||
| Taxonomic identifier | 643648 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Firmicutes › Clostridia › Clostridiales › Syntrophomonadaceae › Syntrophothermus › ![]() |
Protein attributes
| Sequence length | 319 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate. SAAS SAAS000023 HAMAP-Rule MF_00339 |
| Pathway | Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 3/4. SAAS SAAS000023 HAMAP-Rule MF_00339 |
| Subcellular location | Cytoplasm By similarity SAAS SAAS000023 HAMAP-Rule MF_00339. |
| Sequence similarities | Belongs to the phosphofructokinase family. HAMAP-Rule MF_00339 |
Ontologies
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Regions | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Nucleotide binding | 21 – 25 | 5 | ATP By similarity HAMAP-Rule MF_00339 | ||||||
| Nucleotide binding | 154 – 158 | 5 | ATP By similarity HAMAP-Rule MF_00339 | ||||||
| Nucleotide binding | 171 – 187 | 17 | ATP By similarity HAMAP-Rule MF_00339 | ||||||
Sites | |||||||||
| Active site | 127 | 1 | Proton acceptor By similarity HAMAP-Rule MF_00339 | ||||||
| Metal binding | 185 | 1 | Magnesium; via carbonyl oxygen By similarity HAMAP-Rule MF_00339 | ||||||
| Metal binding | 187 | 1 | Magnesium By similarity HAMAP-Rule MF_00339 | ||||||
| Binding site | 162 | 1 | Substrate By similarity HAMAP-Rule MF_00339 | ||||||
| Binding site | 243 | 1 | Substrate By similarity HAMAP-Rule MF_00339 | ||||||
| Binding site | 249 | 1 | Substrate By similarity HAMAP-Rule MF_00339 | ||||||
| Binding site | 252 | 1 | Substrate By similarity HAMAP-Rule MF_00339 | ||||||
Sequences
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References
| [1] | "Complete genome sequence of Syntrophothermus lipocalidus type strain (TGB-C1T)." US DOE Joint Genome Institute (JGI-PGF) Djao O., Zhang X., Lucas S., Lapidus A., Glavina Del Rio T., Nolan M., Tice H., Cheng J., Han C., Tapia R., Goodwin L., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Mikhailova N., Ovchinnikova G., Pati A. Klenk H.Stand. Genomic Sci. 3:267-275(2010) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 12680 / TGB-C1. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP002048 Genomic DNA. Translation: ADI02460.1. |
| RefSeq | YP_003703025.1. NC_014220.1. |
3D structure databases | |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ADI02460; ADI02460; Slip_1702. |
| GeneID | 9274508. |
| KEGG | slp:Slip_1702. |
| PATRIC | 38269916. VBISynLip21176_1762. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HOG000248870. |
| KO | K00850. |
| OMA | EFKTVEG. |
Enzyme and pathway databases | |
| BioCyc | SLIP643648:GHUR-1741-MONOMER. |
| UniPathway | UPA00109; UER00182. |
Family and domain databases | |
| HAMAP | MF_00339. Phosphofructokinase. |
| InterPro | IPR012003. ATP_PFK_prok. IPR012828. PFKA_ATP. IPR022953. Phosphofructokinase. IPR015912. Phosphofructokinase_CS. IPR000023. Phosphofructokinase_dom. [Graphical view] |
| Pfam | PF00365. PFK. 1 hit. [Graphical view] |
| PIRSF | PIRSF000532. ATP_PFK_prok. 1 hit. |
| PRINTS | PR00476. PHFRCTKINASE. |
| SUPFAM | SSF53784. Ppfruckinase. 1 hit. |
| TIGRFAMs | TIGR02482. PFKA_ATP. 1 hit. |
| PROSITE | PS00433. PHOSPHOFRUCTOKINASE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | D7CP25_SYNLT | ||||||||
| Accession | Primary (citable) accession number: D7CP25 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
