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D7CNI7

- D7CNI7_SYNLT

UniProt

D7CNI7 - D7CNI7_SYNLT

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Slip_1509

Organism
Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSLIP643648:GHUR-1534-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Slip_1509Imported
OrganismiSyntrophothermus lipocalidus (strain DSM 12680 / TGB-C1)Imported
Taxonomic identifieri643648 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesSyntrophomonadaceaeSyntrophothermus
ProteomesiUP000000378: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD7CNI7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiVEVKYGQ.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D7CNI7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVMPVIKPGT PFIPMEPVFH PEAFDDENYG FQIKWDGTRI IAHLDGPVEL
60 70 80 90 100
FNRKMKKRTA QYPEVADALK EALRGTSAVL DGEIVTLSGD KPNFHQLMRR
110 120 130 140 150
DRATDARTIN HLATRIPVTY VVFDILYLKD KCLADLPFWQ RDGILRSTLK
160 170 180 190 200
SSDPVVVTDT FKGRGKALFA IVREKGLEGI VAKRLESTYQ IGKKSAKWLK
210 220 230 240 250
IKNRQRTTAL VGGFVAEGKQ VRSLFLGQLV EGDLIYIGRA SSGLDEETGR
260 270 280 290 300
ALYDFLSRRA ENTCPFVNPP AVERRENLVW VLPSASVEVE FYDYTEKGYL
310
RHPVIKRVEL GL
Length:312
Mass (Da):35,298
Last modified:August 10, 2010 - v1
Checksum:i3908B533729C26F2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002048 Genomic DNA. Translation: ADI02272.1.
RefSeqiYP_003702837.1. NC_014220.1.

Genome annotation databases

EnsemblBacteriaiADI02272; ADI02272; Slip_1509.
GeneIDi9274301.
KEGGislp:Slip_1509.
PATRICi38269498. VBISynLip21176_1566.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002048 Genomic DNA. Translation: ADI02272.1 .
RefSeqi YP_003702837.1. NC_014220.1.

3D structure databases

ProteinModelPortali D7CNI7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADI02272 ; ADI02272 ; Slip_1509 .
GeneIDi 9274301.
KEGGi slp:Slip_1509.
PATRICi 38269498. VBISynLip21176_1566.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi VEVKYGQ.

Enzyme and pathway databases

BioCyci SLIP643648:GHUR-1534-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 12680 / TGB-C1Imported.

Entry informationi

Entry nameiD7CNI7_SYNLT
AccessioniPrimary (citable) accession number: D7CNI7
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: October 29, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3