D7CLZ4 (D7CLZ4_SYNLT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Flagellar basal body rod protein FlgB PIRNR PIRNR002889

Gene names

Ordered Locus Names:

Slip_0950

Organism

Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) [Complete proteome] [HAMAP] EMBL ADI01729.1

Taxonomic identifier

643648 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Syntrophomonadaceae › Syntrophothermus › Syntrophothermus lipocalidus

Protein attributes

Sequence length	138 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body By similarity. PIRNR PIRNR002889
Subunit structure	The basal body constitutes a major portion of the flagellar organelle and consists of a number of rings mounted on a central rod By similarity. PIRNR PIRNR002889
Subcellular location	Bacterial flagellum basal body By similarity PIRNR PIRNR002889.
Sequence similarities	Belongs to the flagella basal body rod proteins family. PIRNR PIRNR002889

Ontologies

Keywords
Cellular component	Bacterial flagellum PIRNR PIRNR002889 Cell projection Cilium Flagellum EMBL ADI01729.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	ciliary or flagellar motility Inferred from electronic annotation. Source: InterPro
Cellular_component	bacterial-type flagellum basal body Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	motor activity Inferred from electronic annotation. Source: InterPro structural molecule activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D7CLZ4 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: 88C0B9FF946F6D21	FASTA	138	15,501
	10 20 30 40 50 60 MLDKVIGNQR INVLEKALDG AMLRQKVIAN NLANVDTPGY KAMEVTFEEQ LKNSMKEAGS 70 80 90 100 110 120 EYNLKTTHPR HLQIPNISSF QVGINVAEGY TFRNDGNSVD IDREMARLSK NVVYYNAVST 130 SMSEEFKLLR MAITEGRG

References

[1]

"Complete genome sequence of Syntrophothermus lipocalidus type strain (TGB-C1T)." US DOE Joint Genome Institute (JGI-PGF) Djao O., Zhang X., Lucas S., Lapidus A., Glavina Del Rio T., Nolan M., Tice H., Cheng J., Han C., Tapia R., Goodwin L., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Mikhailova N., Ovchinnikova G., Pati A. , Brambilla E., Chen A., Palaniappan K., Land M., Hauser L., Chang Y., Jeffries C., Rohde M., Sikorski J., Spring S., Goker M., Detter J., Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P., Kyrpides N., Klenk H. Stand. Genomic Sci. 3:267-275(2010) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 12680 / TGB-C1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002048 Genomic DNA. Translation: ADI01729.1.
RefSeq	YP_003702294.1. NC_014220.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADI01729; ADI01729; Slip_0950.
GeneID	9273736.
KEGG	slp:Slip_0950.
PATRIC	38268324. VBISynLip21176_0985.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000257192.
KO	K02387.
OMA	NYKAKKV.
Enzyme and pathway databases
BioCyc	SLIP643648:GHUR-969-MONOMER.
Family and domain databases
InterPro	IPR001444. Flag_bb_rod_N. IPR019776. Flagellar_basal_body_rod_CS. IPR006300. FlgB. [Graphical view]
Pfam	PF00460. Flg_bb_rod. 1 hit. [Graphical view]
PIRSF	PIRSF002889. Rod_FlgB. 1 hit.
TIGRFAMs	TIGR01396. FlgB. 1 hit.
PROSITE	PS00588. FLAGELLA_BB_ROD. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D7CLZ4_SYNLT

Accession

Primary (citable) accession number: D7CLZ4

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	May 1, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)