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D7CK69

- D7CK69_SYNLT

UniProt

D7CK69 - D7CK69_SYNLT

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Protein

Alanine racemase

Gene
Slip_2314
Organism
Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotationSAAS annotations

Cofactori

Pyridoxal phosphate By similarity.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei39 – 391Proton acceptor; specific for D-alanine By similarityUniRule annotation
Binding sitei137 – 1371Substrate By similarityUniRule annotation
Active sitei266 – 2661Proton acceptor; specific for L-alanine By similarityUniRule annotation
Binding sitei339 – 3391Substrate; via amide nitrogen By similarityUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciSLIP643648:GHUR-2367-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Slip_2314Imported
OrganismiSyntrophothermus lipocalidus (strain DSM 12680 / TGB-C1)Imported
Taxonomic identifieri643648 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesSyntrophomonadaceaeSyntrophothermus
ProteomesiUP000000378: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei39 – 391N6-(pyridoxal phosphate)lysine By similarityUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliD7CK69.

Family & Domainsi

Sequence similaritiesi

Belongs to the alanine racemase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000031444.
KOiK01775.
OMAiKIYFVCK.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.
PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

D7CK69-1 [UniParc]FASTAAdd to Basket

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MQLMPNNRWI EVDIDALVHN LEAVRSLLKE NTRLIAVLKA NAYGLGAVGT    50
ARVLARHGVD YFAVTFPEEA FELREGGIST DILVFAPAGE REIEKAVEQG 100
LTLTVASYRD YRLASEAASR FNKKVRIHLK IDTGLGRFGV TADRALELAR 150
LIHYDQWLVL EGLYTHFAEA GARSPKFTQS QFEQLQKTVD ALTSNGIRPA 200
LIHCCNSAAA LRFPEMHLDA VRIGTLLGGQ HPAGHVPNKI KLKNPYRFKA 250
RVTAVREMPA GSYLGYYRTY RTRAASKIAV VPVGFADGLG LEALSRPGSW 300
FDLFKIIAKL VGSYLNLSRF TVKVKIGKDE YPVRGKVFMQ FCLVELPPDF 350
PVEPGTVVEV PVKRTLAPSD IRRAYIENGC LVEAEGDDEG VLGAKREVVE 400
Length:400
Mass (Da):44,295
Last modified:August 10, 2010 - v1
Checksum:i9E4309FA4B90F43A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002048 Genomic DNA. Translation: ADI03053.1.
RefSeqiYP_003703618.1. NC_014220.1.

Genome annotation databases

EnsemblBacteriaiADI03053; ADI03053; Slip_2314.
GeneIDi9275133.
KEGGislp:Slip_2314.
PATRICi38271172. VBISynLip21176_2377.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002048 Genomic DNA. Translation: ADI03053.1 .
RefSeqi YP_003703618.1. NC_014220.1.

3D structure databases

ProteinModelPortali D7CK69.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADI03053 ; ADI03053 ; Slip_2314 .
GeneIDi 9275133.
KEGGi slp:Slip_2314.
PATRICi 38271172. VBISynLip21176_2377.

Phylogenomic databases

HOGENOMi HOG000031444.
KOi K01775.
OMAi KIYFVCK.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci SLIP643648:GHUR-2367-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 12680 / TGB-C1.

Entry informationi

Entry nameiD7CK69_SYNLT
AccessioniPrimary (citable) accession number: D7CK69
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: July 9, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3