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D7CDP4 (D7CDP4_STRBB) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length1194 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D7CDP4 [UniParc].

Last modified August 10, 2010. Version 1.
Checksum: 0A5C643EFEF46F9C

FASTA1,194127,839
        10         20         30         40         50         60 
MSLDRFDTLL VANRGEIAAR IVRTARRLGL RTVAVFSDPD RSSPHVRLAD TAVRLGPAPA 

        70         80         90        100        110        120 
KDSYLNADLV LRAAKDTGAG AIHPGYGFLS EDAEFARRCE AAGIVFVGPS PEQLELFGAK 

       130        140        150        160        170        180 
HTARAAAERA GVPLAPGTGL LPDLPAAHAA AERIGYPVML KATGGGGGIG MGACHGPDEL 

       190        200        210        220        230        240 
ADAWERVQRV ASASFSSHGV FLERLVEQAR HVEVQVFGDG LGRVVVLGDR DCSLQRRNQK 

       250        260        270        280        290        300 
VLEEAPAPGL PDAVRASLAA SARDLCASVG YRSAGTVEFV YDAARQEAYF LEVNTRLQVE 

       310        320        330        340        350        360 
HPVTEEIYGI DLVEWMLRLA QGDTTVVRDP GTPRGHAIEA RVYAEDPARG HRPSAGLLTN 

       370        380        390        400        410        420 
VAFPPDVRVD TWVETGAEVT TSYDPMLAKI VAYGADRTQA LRRLDAALTA TRVDGIETNL 

       430        440        450        460        470        480 
GLVRAALADA EFRTAEHSTA TLARITDPTP RIEVTASGTL TTVQDWPGRT GYWQVGVPPS 

       490        500        510        520        530        540 
GPMDDLSFRL GNRALGNDEG APGLECTLQG PTLRFSHATA LCVTGAPAPV TVDGEPVPQW 

       550        560        570        580        590        600 
EPVTVPAGAV LTVGAPGRHG LRTYVLFAGG LEIPAFLGSA ATFTLGRFGG HGGRALRTGD 

       610        620        630        640        650        660 
VLHGGTATRA GAPVPTADRP AFGASWRIGA VEGPHAAPEF FTEDDIRDFY DADWKVHFNS 

       670        680        690        700        710        720 
ARTGVRLVGP KPRWARRDGG EAGLHPSNIH DTPYSVGAVD YTGDMPVLLG PDGPSLGGFV 

       730        740        750        760        770        780 
CPATVVKGQR WKLGQVRPGD TVRFVPLTDR AASALRRTPQ ADPVPDRAVI VDGGVLHRAE 

       790        800        810        820        830        840 
YRGKHQREAV TYRRSGDDNV LVEFGPMQLD LGLRMRVHAM MEAVAAERLP GVTDLTPGIR 

       850        860        870        880        890        900 
SLQVQTDPDV LPQPELLSVL RRIESKLPPT EELVVPSRTV HLPLSWDDPA TREAIERYMA 

       910        920        930        940        950        960 
GVRDDAPWCP WNIEFIRRVN GLGSVDDVFR TVFDAEYLVL GLGDVYLGAP VATPLDPRHR 

       970        980        990       1000       1010       1020 
LVTTKYNPAR TWTAENSVGI GGAYLCIYGM EGPGGYQFVG RTTQVWSGWQ QRGAFQPGSP 

      1030       1040       1050       1060       1070       1080 
WLLRFFDRIK WYPVEADELL ELRADMAAGR FAPRIEDGTF ALADHQRFLT AYADSIAAFR 

      1090       1100       1110       1120       1130       1140 
SRQAAAFAAE RDAWEAAGEF ARAERAAGSA PPPTDLAVPA GGHLVEAEFA ASVWQVAVAA 

      1150       1160       1170       1180       1190 
GDTVTAGQRL LALEAMKMES FVHAPHGGVV ARVLAKPGDQ VEPGSPLLIL GPAA 

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References

[1]"Genome sequence of the milbemycin-producing bacterium Streptomyces bingchenggensis."
Wang X.J., Yan Y.J., Zhang B., An J., Wang J.J., Tian J., Jiang L., Chen Y.H., Huang S.X., Yin M., Zhang J., Gao A.L., Liu C.X., Zhu Z.X., Xiang W.S.
J. Bacteriol. 192:4526-4527(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BCW-1 EMBL ADI04559.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002047 Genomic DNA. Translation: ADI04559.1.
RefSeqYP_004959690.1. NC_016582.1.

3D structure databases

ProteinModelPortalD7CDP4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADI04559; ADI04559; SBI_01438.
GeneID11615773.
KEGGsbh:SBI_01438.
PATRIC43260516. VBIStrBin158249_1476.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000251581.
KOK01941.
OMAVEFIYDP.

Enzyme and pathway databases

BioCycSBIN749414:GHKA-1439-MONOMER.

Family and domain databases

Gene3D3.30.1360.40. 1 hit.
3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
3.40.50.20. 1 hit.
InterProIPR003833. Allophan_hydro_1.
IPR003778. Allophan_hydro_2.
IPR024946. Arg_repress_C-like.
IPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR001882. Biotin_BS.
IPR011764. Biotin_carboxylation_dom.
IPR005482. Biotin_COase_C.
IPR000089. Biotin_lipoyl.
IPR005481. CarbamoylP_synth_lsu_N.
IPR005479. CbamoylP_synth_lsu-like_ATP-bd.
IPR016185. PreATP-grasp_dom.
IPR011054. Rudment_hybrid_motif.
IPR011053. Single_hybrid_motif.
IPR014084. Urea_COase.
[Graphical view]
PfamPF02682. AHS1. 1 hit.
PF02626. AHS2. 1 hit.
PF02785. Biotin_carb_C. 1 hit.
PF00364. Biotin_lipoyl. 1 hit.
PF00289. CPSase_L_chain. 1 hit.
PF02786. CPSase_L_D2. 1 hit.
[Graphical view]
SMARTSM00796. AHS1. 1 hit.
SM00797. AHS2. 1 hit.
SM00878. Biotin_carb_C. 1 hit.
[Graphical view]
SUPFAMSSF51230. SSF51230. 1 hit.
SSF51246. SSF51246. 1 hit.
SSF52440. SSF52440. 1 hit.
TIGRFAMsTIGR00724. urea_amlyse_rel. 1 hit.
TIGR02712. urea_carbox. 1 hit.
PROSITEPS50975. ATP_GRASP. 1 hit.
PS50979. BC. 1 hit.
PS00188. BIOTIN. 1 hit.
PS50968. BIOTINYL_LIPOYL. 1 hit.
PS00866. CPSASE_1. 1 hit.
PS00867. CPSASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD7CDP4_STRBB
AccessionPrimary (citable) accession number: D7CDP4
Entry history
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: March 19, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)