D7CDP4 (D7CDP4_STRBB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Urea amidolyase EMBL ADI04559.1

Gene names

Name:	uahA EMBL ADI04559.1
Ordered Locus Names:	SBI_01438 EMBL ADI04559.1

Organism

Streptomyces bingchenggensis (strain BCW-1) [Complete proteome] [HAMAP] EMBL ADI04559.1

Taxonomic identifier

749414 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces › Streptomyces bingchenggensis

Protein attributes

Sequence length	1194 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Ligand	Biotin RuleBase RU000428
Molecular function	Lyase EMBL ADI04559.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro biotin carboxylase activity Inferred from electronic annotation. Source: InterPro lyase activity Inferred from electronic annotation. Source: UniProtKB-KW metal ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D7CDP4 [UniParc]. Last modified August 10, 2010. Version 1. Checksum: 0A5C643EFEF46F9C	FASTA	1,194	127,839
	10 20 30 40 50 60 MSLDRFDTLL VANRGEIAAR IVRTARRLGL RTVAVFSDPD RSSPHVRLAD TAVRLGPAPA 70 80 90 100 110 120 KDSYLNADLV LRAAKDTGAG AIHPGYGFLS EDAEFARRCE AAGIVFVGPS PEQLELFGAK 130 140 150 160 170 180 HTARAAAERA GVPLAPGTGL LPDLPAAHAA AERIGYPVML KATGGGGGIG MGACHGPDEL 190 200 210 220 230 240 ADAWERVQRV ASASFSSHGV FLERLVEQAR HVEVQVFGDG LGRVVVLGDR DCSLQRRNQK 250 260 270 280 290 300 VLEEAPAPGL PDAVRASLAA SARDLCASVG YRSAGTVEFV YDAARQEAYF LEVNTRLQVE 310 320 330 340 350 360 HPVTEEIYGI DLVEWMLRLA QGDTTVVRDP GTPRGHAIEA RVYAEDPARG HRPSAGLLTN 370 380 390 400 410 420 VAFPPDVRVD TWVETGAEVT TSYDPMLAKI VAYGADRTQA LRRLDAALTA TRVDGIETNL 430 440 450 460 470 480 GLVRAALADA EFRTAEHSTA TLARITDPTP RIEVTASGTL TTVQDWPGRT GYWQVGVPPS 490 500 510 520 530 540 GPMDDLSFRL GNRALGNDEG APGLECTLQG PTLRFSHATA LCVTGAPAPV TVDGEPVPQW 550 560 570 580 590 600 EPVTVPAGAV LTVGAPGRHG LRTYVLFAGG LEIPAFLGSA ATFTLGRFGG HGGRALRTGD 610 620 630 640 650 660 VLHGGTATRA GAPVPTADRP AFGASWRIGA VEGPHAAPEF FTEDDIRDFY DADWKVHFNS 670 680 690 700 710 720 ARTGVRLVGP KPRWARRDGG EAGLHPSNIH DTPYSVGAVD YTGDMPVLLG PDGPSLGGFV 730 740 750 760 770 780 CPATVVKGQR WKLGQVRPGD TVRFVPLTDR AASALRRTPQ ADPVPDRAVI VDGGVLHRAE 790 800 810 820 830 840 YRGKHQREAV TYRRSGDDNV LVEFGPMQLD LGLRMRVHAM MEAVAAERLP GVTDLTPGIR 850 860 870 880 890 900 SLQVQTDPDV LPQPELLSVL RRIESKLPPT EELVVPSRTV HLPLSWDDPA TREAIERYMA 910 920 930 940 950 960 GVRDDAPWCP WNIEFIRRVN GLGSVDDVFR TVFDAEYLVL GLGDVYLGAP VATPLDPRHR 970 980 990 1000 1010 1020 LVTTKYNPAR TWTAENSVGI GGAYLCIYGM EGPGGYQFVG RTTQVWSGWQ QRGAFQPGSP 1030 1040 1050 1060 1070 1080 WLLRFFDRIK WYPVEADELL ELRADMAAGR FAPRIEDGTF ALADHQRFLT AYADSIAAFR 1090 1100 1110 1120 1130 1140 SRQAAAFAAE RDAWEAAGEF ARAERAAGSA PPPTDLAVPA GGHLVEAEFA ASVWQVAVAA 1150 1160 1170 1180 1190 GDTVTAGQRL LALEAMKMES FVHAPHGGVV ARVLAKPGDQ VEPGSPLLIL GPAA

References

[1]

"Genome sequence of the milbemycin-producing bacterium Streptomyces bingchenggensis." Wang X.J., Yan Y.J., Zhang B., An J., Wang J.J., Tian J., Jiang L., Chen Y.H., Huang S.X., Yin M., Zhang J., Gao A.L., Liu C.X., Zhu Z.X., Xiang W.S. J. Bacteriol. 192:4526-4527(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BCW-1 EMBL ADI04559.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002047 Genomic DNA. Translation: ADI04559.1.
RefSeq	YP_004959690.1. NC_016582.1.
3D structure databases
ProteinModelPortal	D7CDP4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADI04559; ADI04559; SBI_01438.
GeneID	11615773.
KEGG	sbh:SBI_01438.
PATRIC	43260516. VBIStrBin158249_1476.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000251581.
KO	K01941.
OMA	VEWMVRQ.
Enzyme and pathway databases
BioCyc	SBIN749414:GHKA-1439-MONOMER.
Family and domain databases
Gene3D	3.30.1360.40. 1 hit. 3.30.1490.20. 1 hit. 3.30.470.20. 1 hit. 3.40.50.20. 1 hit.
InterPro	IPR003833. Allophan_hydro_1. IPR003778. Allophan_hydro_2. IPR024946. Arg_repress_C-like. IPR011761. ATP-grasp. IPR013815. ATP_grasp_subdomain_1. IPR013816. ATP_grasp_subdomain_2. IPR001882. Biotin_BS. IPR011764. Biotin_carboxylation_dom. IPR005482. Biotin_COase_C. IPR000089. Biotin_lipoyl. IPR005481. CarbamoylP_synth_lsu_N. IPR005479. CbamoylP_synth_lsu-like_ATP-bd. IPR016185. PreATP-grasp_dom. IPR011054. Rudment_hybrid_motif. IPR011053. Single_hybrid_motif. IPR014084. Urea_COase. [Graphical view]
Pfam	PF02682. AHS1. 1 hit. PF02626. AHS2. 1 hit. PF02785. Biotin_carb_C. 1 hit. PF00364. Biotin_lipoyl. 1 hit. PF00289. CPSase_L_chain. 1 hit. PF02786. CPSase_L_D2. 1 hit. [Graphical view]
SMART	SM00796. AHS1. 1 hit. SM00797. AHS2. 1 hit. SM00878. Biotin_carb_C. 1 hit. [Graphical view]
SUPFAM	SSF51230. Hybrid_motif. 1 hit. SSF52440. PreATP-grasp-like. 1 hit. SSF51246. Rudmnt_hyb_motif. 1 hit.
TIGRFAMs	TIGR00724. urea_amlyse_rel. 1 hit. TIGR02712. urea_carbox. 1 hit.
PROSITE	PS50975. ATP_GRASP. 1 hit. PS50979. BC. 1 hit. PS00188. BIOTIN. 1 hit. PS50968. BIOTINYL_LIPOYL. 1 hit. PS00866. CPSASE_1. 1 hit. PS00867. CPSASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D7CDP4_STRBB

Accession

Primary (citable) accession number: D7CDP4

Entry history

Integrated into UniProtKB/TrEMBL:	August 10, 2010
Last sequence update:	August 10, 2010
Last modified:	May 29, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)