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Protein
Submitted name:

Alpha amylase

Gene

SBI_03050

Organism
Streptomyces bingchenggensis (strain BCW-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciSBIN749414:GHKA-3063-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylaseImported
Gene namesi
Ordered Locus Names:SBI_03050Imported
OrganismiStreptomyces bingchenggensis (strain BCW-1)Imported
Taxonomic identifieri749414 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces
ProteomesiUP000000377 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi749414.SBI_03050.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000248560.
KOiK06044.
OMAiDINWRRF.

Family and domain databases

Gene3Di1.10.10.470. 1 hit.
3.20.20.80. 4 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013797. Maltooligo_trehalose_synth_N.
IPR012767. Trehalose_TreY.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
TIGRFAMsiTIGR02401. trehalose_TreY. 1 hit.

Sequencei

Sequence statusi: Complete.

D7C6F4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSDRTVPGS AAPTATYRLQ LQPAFPFEAA GAAVPYLAAL GVSHLHLSPV
60 70 80 90 100
LEARPGSTHG YDVVDHSAVR AELGGEEGLR ALAHTARAHG LGLIVDIVPN
110 120 130 140 150
HMAVPAPERL NRPLWEVLKD GPASPYARWF DIDWGRHCGK VLLPVLGGPL
160 170 180 190 200
GEELAALRVA DGALRYHDHE FPLRAGTEGL PLPELLDRQW YRLGWWRLAR
210 220 230 240 250
TELNYRRFFT ISELIAVRVE DPEVFAATHG KLLELVRDGV IDGLRVDHPD
260 270 280 290 300
GLADPEGYLR RLDREVRAAA GGGRWTVVEK ILGRGERLPA HWPVAGTTGY
310 320 330 340 350
DALHHIDGLF VDPAGLEELT AQYRGFAAPP EDLGGDWPAT VRRAARHVVT
360 370 380 390 400
HELAAEVERL VRTAVRICAA EPRPRDHAPW ALRTAIRELL VRLPVYRPYV
410 420 430 440 450
SPDTPPTRTD AEMLILAARD ARAAFAVREE ARVVFTVRDA ALGRLGDGPH
460 470 480 490 500
HRDFCARFAQ TAAALRAKSV EDTAFYRYAP LLSAAEVGGD PGQPAVSPDR
510 520 530 540 550
FHAFAARLQT DWPSTGTVLS THDTKRSADV RARLAALTEC PDRWGRLLEA
560 570 580 590 600
VAVEVRETAS PGTAAAPDPH LAWTAWQTAV GLGSPDGGRL VPAVLKGVRE
610 620 630 640 650
AGLRTTWTEQ DPAYEDEVAA FLKAGPCDPD HPAWAALGGA LDAPARANAL
660 670 680 690 700
GAALLQLTMP GVPDLYMGTE HTYAALVDPD NRRPPELRPE LLAHLDAGRE
710 720 730 740 750
PDGPSAEKLL LTAAALRLRR RNPQWFGPSG GYTPLAAEGP AAAHCVAFLR
760 770 780 790 800
TDGEGGDGDG GGGGGGAVTA VTRLSRRLAE AGGWRGTALA LPPGRWRDVL
810 820
TGRTAEGADP LSDLFDRFPV ALLIRS
Length:826
Mass (Da):88,977
Last modified:August 10, 2010 - v1
Checksum:i9334399844BA8F01
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002047 Genomic DNA. Translation: ADI06171.1.
RefSeqiWP_014175648.1. NC_016582.1.

Genome annotation databases

EnsemblBacteriaiADI06171; ADI06171; SBI_03050.
KEGGisbh:SBI_03050.
PATRICi43263914. VBIStrBin158249_3163.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002047 Genomic DNA. Translation: ADI06171.1.
RefSeqiWP_014175648.1. NC_016582.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi749414.SBI_03050.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADI06171; ADI06171; SBI_03050.
KEGGisbh:SBI_03050.
PATRICi43263914. VBIStrBin158249_3163.

Phylogenomic databases

HOGENOMiHOG000248560.
KOiK06044.
OMAiDINWRRF.

Enzyme and pathway databases

BioCyciSBIN749414:GHKA-3063-MONOMER.

Family and domain databases

Gene3Di1.10.10.470. 1 hit.
3.20.20.80. 4 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013797. Maltooligo_trehalose_synth_N.
IPR012767. Trehalose_TreY.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
TIGRFAMsiTIGR02401. trehalose_TreY. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the milbemycin-producing bacterium Streptomyces bingchenggensis."
    Wang X.J., Yan Y.J., Zhang B., An J., Wang J.J., Tian J., Jiang L., Chen Y.H., Huang S.X., Yin M., Zhang J., Gao A.L., Liu C.X., Zhu Z.X., Xiang W.S.
    J. Bacteriol. 192:4526-4527(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BCW-1Imported.

Entry informationi

Entry nameiD7C6F4_STRBB
AccessioniPrimary (citable) accession number: D7C6F4
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: July 22, 2015
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.