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Protein
Submitted name:

Rhamnosidase

Gene

SBI_00764

Organism
Streptomyces bingchenggensis (strain BCW-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciSBIN749414:GHKA-765-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
RhamnosidaseImported
Gene namesi
Ordered Locus Names:SBI_00764Imported
OrganismiStreptomyces bingchenggensis (strain BCW-1)Imported
Taxonomic identifieri749414 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces
Proteomesi
  • UP000000377 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525Sequence analysisAdd
BLAST
Chaini26 – 10711046Sequence analysisPRO_5003094043Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi749414.SBI_00764.

Structurei

3D structure databases

ProteinModelPortaliD7C463.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini348 – 519172Bac_rhamnosid_NInterPro annotationAdd
BLAST
Domaini528 – 1031504Bac_rhamnosidInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105DN8. Bacteria.
ENOG410XNWE. LUCA.
HOGENOMiHOG000244024.
KOiK05989.
OMAiAIGDWMY.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
2.60.40.10. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR008902. Bac_rhamnosid.
IPR013737. Bac_rhamnosid_N.
IPR003961. FN3_dom.
IPR008979. Galactose-bd-like.
IPR013783. Ig-like_fold.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF05592. Bac_rhamnosid. 1 hit.
PF08531. Bac_rhamnosid_N. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.
SSF49265. SSF49265. 1 hit.
SSF49785. SSF49785. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D7C463-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MISRRNLLGT ATAAGPALTG LTALAATTGK AEAAEPGYGG LRVEKTTVEY
60 70 80 90 100
ADRPLGLDAP HPRLSWQLGS DRRNQSQSAY QLRVATSPGR IGAPDVWDSG
110 120 130 140 150
KVSSHQSVLV PYDGPKLRAR TRYHWAVRVW DGQGRPSPWS EPTWWETGLG
160 170 180 190 200
TEDEGAARWV AAPDTVTRGP DLAKADWVWY PEGDPASSAP AGTRYFRGSL
210 220 230 240 250
DVSGSVRLAR LALVADDGFT AWVNGTEIGG RAPVQENWRH PVVVDVTALL
260 270 280 290 300
REGANTIAVA AVNASSSPAG LLGVLELTDT DGVRSLTTSA AWKATDTEPS
310 320 330 340 350
GDWHLPAYDD GGWAAAKVLA PWGGGPWGRV RAAQRPALVR RDFRLAAKPV
360 370 380 390 400
ARARLYSTAL GLYEAEINGH RVGRDQLAPG WTDYRKRVQY QTYDVTDLLR
410 420 430 440 450
HGANAIGVIL ASGWYSGSVA WFGQELYGER PALRAELEVT YADGSTDRVT
460 470 480 490 500
ADTHWRCATG PILTADLMAG EEYDARLEVS GWSSPAFDDS LWQSVDVVPA
510 520 530 540 550
DTTSAVSVVA QTDAPVRVAR ELAAVRVTEP KPGVYVFDLG QNMVGSVRLR
560 570 580 590 600
VRGEAGRTVR LRHAEVLDKD GMLYTANLRT AQATDSYTLK GSGTETFEPR
610 620 630 640 650
FTFHGFRYVE VTGYPGTPDT KSVTGRVMHT GAPFTMSFTT DVPMLDQLHR
660 670 680 690 700
NITWGQRGNF LSVPTDTPAR DERLGWTGDI NVFSATAAYT MESARFLAKW
710 720 730 740 750
LRDLRDGQSD AGAFPDVAPR IGNLGEGTAG WGDAGVTVPW NLYQAYGDRQ
760 770 780 790 800
ILADNFPAMR AWITYLEQHS SGCLRPAEGY GDWLNVADET PKDVIATAYF
810 820 830 840 850
AHSTQLVAKA ARVLGHDPAP YDTLAAKVRE AFNRAYVSAD GTVKGNTQTA
860 870 880 890 900
YVLALSMDLL PDSARTPAAE RLVELIRSKD RHLSTGFLGT PRLLPTLTAT
910 920 930 940 950
GHTDVAYQLL EQRTFPSWGY QIDRGSTTMW ERWDSLRPDG SFQDPGMNSF
960 970 980 990 1000
NHYAYGSVGE WMYQNITGIG MGEPGFRSIV IRPRPGGDVH EANGRYDSLY
1010 1020 1030 1040 1050
GPITTRWTRA NDGAFTLDVS VPVNTTAEVW LPAATSRAAS GISHAGATFL
1060 1070
RLDDGCAVYG VGSGPYRFTA P
Length:1,071
Mass (Da):116,243
Last modified:August 10, 2010 - v1
Checksum:i21B51EBCED80862B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002047 Genomic DNA. Translation: ADI03885.1.
RefSeqiWP_014173364.1. NC_016582.1.

Genome annotation databases

EnsemblBacteriaiADI03885; ADI03885; SBI_00764.
KEGGisbh:SBI_00764.
PATRICi43259126. VBIStrBin158249_0780.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002047 Genomic DNA. Translation: ADI03885.1.
RefSeqiWP_014173364.1. NC_016582.1.

3D structure databases

ProteinModelPortaliD7C463.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi749414.SBI_00764.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADI03885; ADI03885; SBI_00764.
KEGGisbh:SBI_00764.
PATRICi43259126. VBIStrBin158249_0780.

Phylogenomic databases

eggNOGiENOG4105DN8. Bacteria.
ENOG410XNWE. LUCA.
HOGENOMiHOG000244024.
KOiK05989.
OMAiAIGDWMY.

Enzyme and pathway databases

BioCyciSBIN749414:GHKA-765-MONOMER.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
2.60.40.10. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR008902. Bac_rhamnosid.
IPR013737. Bac_rhamnosid_N.
IPR003961. FN3_dom.
IPR008979. Galactose-bd-like.
IPR013783. Ig-like_fold.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF05592. Bac_rhamnosid. 1 hit.
PF08531. Bac_rhamnosid_N. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.
SSF49265. SSF49265. 1 hit.
SSF49785. SSF49785. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the milbemycin-producing bacterium Streptomyces bingchenggensis."
    Wang X.J., Yan Y.J., Zhang B., An J., Wang J.J., Tian J., Jiang L., Chen Y.H., Huang S.X., Yin M., Zhang J., Gao A.L., Liu C.X., Zhu Z.X., Xiang W.S.
    J. Bacteriol. 192:4526-4527(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BCW-1Imported.

Entry informationi

Entry nameiD7C463_STRBB
AccessioniPrimary (citable) accession number: D7C463
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: December 9, 2015
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.