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D7BB51

- D7BB51_MEISD

UniProt

D7BB51 - D7BB51_MEISD

Protein

Xylose isomerase

Gene

xylA

Organism
Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus silvanus)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (10 Aug 2010)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei54 – 541UniRule annotation
    Active sitei57 – 571UniRule annotation
    Metal bindingi181 – 1811Magnesium 1UniRule annotation
    Metal bindingi217 – 2171Magnesium 1UniRule annotation
    Metal bindingi217 – 2171Magnesium 2UniRule annotation
    Metal bindingi220 – 2201Magnesium 2UniRule annotation
    Metal bindingi245 – 2451Magnesium 1UniRule annotation
    Metal bindingi255 – 2551Magnesium 2UniRule annotation
    Metal bindingi257 – 2571Magnesium 2UniRule annotation
    Metal bindingi287 – 2871Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotation, Metal-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciMSIL526227:GJ9Q-709-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylAUniRule annotation
    Ordered Locus Names:Mesil_0695Imported
    OrganismiMeiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus silvanus)Imported
    Taxonomic identifieri526227 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeMeiothermus
    ProteomesiUP000001916: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliD7BB51.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000022596.
    KOiK01805.
    OMAiDLIPIDA.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013453. XylA_actinobac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02631. xylA_Arthro. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D7BB51-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAYEPKPEHK FTFGLWTVGN VGRDPFGLPT RPPLEPDYIV YKLAEIGAYG    50
    VNLHDNDLIP VEATEAERER ILKRFKKALQ DTGLVVPMAT TNLFGDPAFK 100
    DGAFTSPDAR VRAYALQKTM RAMDLGAELG AKTYVFWGGR EGAEVDAGGN 150
    VLDALAHYRE ALNFLAEYSE DQGYGYRFAL EPKPNEPRGD IYLPVVGAAL 200
    GFIATLDKPH LFGLNPEVAH ETMAGLNFVH AVAQAIDAGK LFHIDLNDQK 250
    MGRFDQDLRF GAENLKTAFF LVKLLEDSGY DGPRHFDAHA LRTEDEAGVW 300
    EFAKGCMRTY LILKEKAERF GRDREIQDLI GAYKVQDEAL ARLTAKYSRE 350
    NARALKGLEF DREALGRRGP GLERLDQLTV ELLLGVR 387
    Length:387
    Mass (Da):43,213
    Last modified:August 10, 2010 - v1
    Checksum:iAD35B8C5DC7A81AB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002042 Genomic DNA. Translation: ADH62611.1.
    RefSeqiWP_013157200.1. NC_014212.1.
    YP_003684119.1. NC_014212.1.

    Genome annotation databases

    EnsemblBacteriaiADH62611; ADH62611; Mesil_0695.
    GeneIDi9250184.
    KEGGimsv:Mesil_0695.
    PATRICi38190106. VBIMeiSil18825_0712.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002042 Genomic DNA. Translation: ADH62611.1 .
    RefSeqi WP_013157200.1. NC_014212.1.
    YP_003684119.1. NC_014212.1.

    3D structure databases

    ProteinModelPortali D7BB51.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADH62611 ; ADH62611 ; Mesil_0695 .
    GeneIDi 9250184.
    KEGGi msv:Mesil_0695.
    PATRICi 38190106. VBIMeiSil18825_0712.

    Phylogenomic databases

    HOGENOMi HOG000022596.
    KOi K01805.
    OMAi DLIPIDA.

    Enzyme and pathway databases

    BioCyci MSIL526227:GJ9Q-709-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013453. XylA_actinobac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02631. xylA_Arthro. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700542 / DSM 9946 / VI-R2Imported.

    Entry informationi

    Entry nameiD7BB51_MEISD
    AccessioniPrimary (citable) accession number: D7BB51
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 10, 2010
    Last sequence update: August 10, 2010
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3