D7B6Q0 (D7B6Q0_NOCDD) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 23.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Phosphoenolpyruvate carboxylase HAMAP-Rule MF_00595 Short name=PEPC HAMAP-Rule MF_00595 Short name=PEPCase HAMAP-Rule MF_00595 EC=4.1.1.31 HAMAP-Rule MF_00595 | ||||
| Gene names |
| ||||
| Organism | Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488) (Actinomadura dassonvillei) [Complete proteome] [HAMAP] EMBL ADH69337.1 | ||||
| Taxonomic identifier | 446468 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptosporangineae › Nocardiopsaceae › Nocardiopsis › ![]() |
Protein attributes
| Sequence length | 908 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595 |
| Catalytic activity | Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. SAAS SAAS018129 HAMAP-Rule MF_00595 |
| Cofactor | Magnesium By similarity. SAAS SAAS018129 HAMAP-Rule MF_00595 |
| Subunit structure | Homotetramer By similarity. HAMAP-Rule MF_00595 |
| Sequence similarities | Belongs to the PEPCase type 1 family. HAMAP-Rule MF_00595 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Carbon dioxide fixation SAAS SAAS018129 HAMAP-Rule MF_00595 |
| Domain | Signal EMBL ADH69337.1 |
| Ligand | Magnesium SAAS SAAS018129 HAMAP-Rule MF_00595 Pyruvate EMBL ADH69337.1 |
| Molecular function | Lyase SAAS SAAS018129 HAMAP-Rule MF_00595 EMBL ADH69337.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | carbon fixation Inferred from electronic annotation. Source: HAMAP oxaloacetate metabolic processInferred from electronic annotation. Source: HAMAP tricarboxylic acid cycleInferred from electronic annotation. Source: InterPro |
| Molecular_function | magnesium ion binding Inferred from electronic annotation. Source: HAMAP phosphoenolpyruvate carboxylase activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 33 | 33 | Potential EMBL ADH69337.1 | ||||||
| Chain | 34 – 908 | 875 | Potential | PRO_5000605130 | |||||
Sites | |||||||||
| Active site | 178 | 1 | By similarity HAMAP-Rule MF_00595 | ||||||
| Active site | 572 | 1 | By similarity HAMAP-Rule MF_00595 | ||||||
Sequences
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References
| [1] | "Complete genome sequence of Nocardiopsis dassonvillei type strain (IMRU 509)." US DOE Joint Genome Institute (JGI-PGF) Sun H., Lapidus A., Nolan M., Lucas S., Glavina Del Rio T., Tice H., Cheng J., Tapia R., Han C., Goodwin L., Pitluck S., Pagani I., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K. Klenk H.Stand. Genomic Sci. 3:325-336(2010) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP002040 Genomic DNA. Translation: ADH69337.1. |
| RefSeq | YP_003681843.1. NC_014210.1. |
3D structure databases | |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ADH69337; ADH69337; Ndas_3940. |
| GeneID | 9247811. |
| KEGG | nda:Ndas_3940. |
| PATRIC | 38217979. VBINocDas52663_4093. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HOG000238647. |
| KO | K01595. |
| OMA | AIPWVFG. |
Enzyme and pathway databases | |
| BioCyc | NDAS446468:GHUM-4704-MONOMER. |
Family and domain databases | |
| HAMAP | MF_00595. PEPcase_type1. |
| InterPro | IPR021135. PEP_COase. IPR018129. PEP_COase_AS. IPR022805. PEP_COase_bac/pln-type. IPR015813. Pyrv/PenolPyrv_Kinase. [Graphical view] |
| Pfam | PF00311. PEPcase. 2 hits. [Graphical view] |
| PRINTS | PR00150. PEPCARBXLASE. |
| SUPFAM | SSF51621. Pyrv/PenolPyrv_Kinase_cat. 1 hit. |
| PROSITE | PS00781. PEPCASE_1. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | D7B6Q0_NOCDD | ||||||||
| Accession | Primary (citable) accession number: D7B6Q0 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
