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Protein
Submitted name:

Alpha-N-arabinofuranosidase

Gene

Ndas_2942

Organism
Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / CIP 107115 / JCM 7437 / KCTC 9190 / NBRC 14626 / NCTC 10488 / NRRL B-5397 / IMRU 509) (Actinomadura dassonvillei)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciNDAS446468:GHUM-2927-MONOMER.

Protein family/group databases

CAZyiCBM13. Carbohydrate-Binding Module Family 13.
GH62. Glycoside Hydrolase Family 62.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-N-arabinofuranosidaseImported (EC:3.2.1.55Imported)
Gene namesi
Ordered Locus Names:Ndas_2942Imported
OrganismiNocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / CIP 107115 / JCM 7437 / KCTC 9190 / NBRC 14626 / NCTC 10488 / NRRL B-5397 / IMRU 509) (Actinomadura dassonvillei)Imported
Taxonomic identifieri446468 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptosporangialesNocardiopsaceaeNocardiopsis
Proteomesi
  • UP000002219 Componenti: Chromosome 1

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 19Sequence analysisAdd BLAST19
ChainiPRO_500309280820 – 474Sequence analysisAdd BLAST455

Interactioni

Protein-protein interaction databases

STRINGi446468.Ndas_2942.

Structurei

3D structure databases

ProteinModelPortaliD7B0W7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini25 – 162Ricin B-type lectinInterPro annotationAdd BLAST138

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105FA9. Bacteria.
ENOG410XNWA. LUCA.
HOGENOMiHOG000025219.
OMAiNWSTANG.
OrthoDBiPOG091H0CR4.

Family and domain databases

InterProiIPR005193. GH62_arabinosidase.
IPR023296. Glyco_hydro_beta-prop.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF03664. Glyco_hydro_62. 1 hit.
PF14200. RicinB_lectin_2. 2 hits.
[Graphical view]
SMARTiSM00458. RICIN. 1 hit.
[Graphical view]
SUPFAMiSSF50370. SSF50370. 1 hit.
SSF75005. SSF75005. 1 hit.
PROSITEiPS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D7B0W7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALVVGGAGA VTVPTPAAAA TVDTNAWYVL VNRDSGKALD VYNLATGDGA
60 70 80 90 100
RITQWTRNDQ YQQQWRFVDS GNGYYRLRSR HSGRVLDVHN WSTANGGGIV
110 120 130 140 150
QWTDHDQANQ QFRLEDSPGG HIRLVNRHSG KAVEVQGAST ADGANVVQYD
160 170 180 190 200
DWGGGNQQWR LVRVDGAGPG ETCALPSSYT WTSTGPLAQP RPGWASLKDF
210 220 230 240 250
THAPYNGQHL VYATTHDTGT SWGSMNFGLF SDWSQMGSAS QNPMPFSAVA
260 270 280 290 300
PTLFYFAPRD VWVLAYQWAG PAFSYRTSTN PVNVNSWSAP QTLFSGSIGD
310 320 330 340 350
SSTGPIDQAL IGDSTHMYLF FAGDNGRIYR AGMPIGDFPG SFGSTSTVVM
360 370 380 390 400
SDSTNNLFEA VQVYRVEGEN RYLMIVEAIG AQGHRYFRSF TATSLDGTWT
410 420 430 440 450
PQAATEGNPF AGRANSGATW TNDISHGELI RTNPDQTMTV DACDMRFLYQ
460 470
GRSPGSGGDY GLLPYRPAVL TLRR
Length:474
Mass (Da):51,513
Last modified:August 10, 2010 - v1
Checksum:iCACA1CA061C199C4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002040 Genomic DNA. Translation: ADH68352.1.
RefSeqiWP_013153959.1. NC_014210.1.

Genome annotation databases

EnsemblBacteriaiADH68352; ADH68352; Ndas_2942.
KEGGinda:Ndas_2942.
PATRICi38215903. VBINocDas52663_3073.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002040 Genomic DNA. Translation: ADH68352.1.
RefSeqiWP_013153959.1. NC_014210.1.

3D structure databases

ProteinModelPortaliD7B0W7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi446468.Ndas_2942.

Protein family/group databases

CAZyiCBM13. Carbohydrate-Binding Module Family 13.
GH62. Glycoside Hydrolase Family 62.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADH68352; ADH68352; Ndas_2942.
KEGGinda:Ndas_2942.
PATRICi38215903. VBINocDas52663_3073.

Phylogenomic databases

eggNOGiENOG4105FA9. Bacteria.
ENOG410XNWA. LUCA.
HOGENOMiHOG000025219.
OMAiNWSTANG.
OrthoDBiPOG091H0CR4.

Enzyme and pathway databases

BioCyciNDAS446468:GHUM-2927-MONOMER.

Family and domain databases

InterProiIPR005193. GH62_arabinosidase.
IPR023296. Glyco_hydro_beta-prop.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF03664. Glyco_hydro_62. 1 hit.
PF14200. RicinB_lectin_2. 2 hits.
[Graphical view]
SMARTiSM00458. RICIN. 1 hit.
[Graphical view]
SUPFAMiSSF50370. SSF50370. 1 hit.
SSF75005. SSF75005. 1 hit.
PROSITEiPS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiD7B0W7_NOCDD
AccessioniPrimary (citable) accession number: D7B0W7
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: November 2, 2016
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.