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D7AJE0

- D7AJE0_GEOSK

UniProt

D7AJE0 - D7AJE0_GEOSK

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Protein
Submitted name:

Pyridoxal-5'-phosphate-dependent decarboxylase

Gene
KN400_1732
Organism
Geobacter sulfurreducens (strain DL-1 / KN400)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciGSUL663917:GLDN-1675-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-5'-phosphate-dependent decarboxylaseImported
Gene namesi
Ordered Locus Names:KN400_1732Imported
OrganismiGeobacter sulfurreducens (strain DL-1 / KN400)Imported
Taxonomic identifieri663917 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter
ProteomesiUP000000389: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD7AJE0.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000282553.
KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

D7AJE0-1 [UniParc]FASTAAdd to Basket

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MPKNRDAARA SLENLYRIFT VPEAPDSTLG AIDQAISGDV TGFLQTHIVA    50
IERDLEDIEA NFSSFSIPEE PTYVSEYTEF VKENLVAHSV HTASPAFVGH 100
MTSALPYFML PLARLMTALN QNVVKVETSK AFTPMERQVL AMLHHLVYRR 150
DEDFYPSWIH NSRHALGAFC SGGTIANITA LWVARNRLFA PNGAFRGIAQ 200
EGLARALKHR GADGIAVLVS ERGHYSLGKA TDLLGIGRDD LVKVKTDANN 250
RIDLKALREE CRRFQDRNTL PLALVGIAGT TETGNVDPLE AMADLAQELG 300
CHFHVDAAWG GPTLFSDRHR SLLKGIERAD SVTIDGHKQL YVPMGAGMVV 350
FKDPTALSAI EHHANYILRH GSKDLGSHTL EGSRPGKAML VHAGFSIIGR 400
KGYELLIDMG IERARTFADM IKQHPDFELI SEPELNILTY RYCPAAVQQT 450
LHDVTDRERA DINALLDLVC QLLQKFQREA GKTFVSRTRL HVARHDRELT 500
VLRVVLANPL TTDEILESVL AEQCELVQLP EIQAVLQQVE ELCTGLAKAA 550
SW 552
Length:552
Mass (Da):61,160
Last modified:August 10, 2010 - v1
Checksum:iBD22CB0295BE5A1C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002031 Genomic DNA. Translation: ADI84544.1.
RefSeqiYP_006890692.1. NC_017454.1.

Genome annotation databases

EnsemblBacteriaiADI84544; ADI84544; KN400_1732.
GeneIDi12439806.
KEGGigsk:KN400_1732.
PATRICi43027492. VBIGeoSul143269_1725.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002031 Genomic DNA. Translation: ADI84544.1 .
RefSeqi YP_006890692.1. NC_017454.1.

3D structure databases

ProteinModelPortali D7AJE0.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADI84544 ; ADI84544 ; KN400_1732 .
GeneIDi 12439806.
KEGGi gsk:KN400_1732.
PATRICi 43027492. VBIGeoSul143269_1725.

Phylogenomic databases

HOGENOMi HOG000282553.
KOi K01580.

Enzyme and pathway databases

BioCyci GSUL663917:GLDN-1675-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "De Novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads."
    Nagarajan H., Butler J.E., Klimes A., Qiu Y., Zengler K., Ward J., Young N.D., Methe B.A., Palsson B.O., Lovley D.R., Barrett C.L.
    PLoS ONE 5:E10922-E10922(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DL-1 / KN400.

Entry informationi

Entry nameiD7AJE0_GEOSK
AccessioniPrimary (citable) accession number: D7AJE0
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: October 16, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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