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D7AJE0

- D7AJE0_GEOSK

UniProt

D7AJE0 - D7AJE0_GEOSK

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Protein
Submitted name:

Pyridoxal-5'-phosphate-dependent decarboxylase

Gene

KN400_1732

Organism
Geobacter sulfurreducens (strain DL-1 / KN400)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciGSUL663917:GLDN-1675-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-5'-phosphate-dependent decarboxylaseImported
Gene namesi
Ordered Locus Names:KN400_1732Imported
OrganismiGeobacter sulfurreducens (strain DL-1 / KN400)Imported
Taxonomic identifieri663917 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter
ProteomesiUP000000389: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD7AJE0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000282553.
KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

D7AJE0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPKNRDAARA SLENLYRIFT VPEAPDSTLG AIDQAISGDV TGFLQTHIVA
60 70 80 90 100
IERDLEDIEA NFSSFSIPEE PTYVSEYTEF VKENLVAHSV HTASPAFVGH
110 120 130 140 150
MTSALPYFML PLARLMTALN QNVVKVETSK AFTPMERQVL AMLHHLVYRR
160 170 180 190 200
DEDFYPSWIH NSRHALGAFC SGGTIANITA LWVARNRLFA PNGAFRGIAQ
210 220 230 240 250
EGLARALKHR GADGIAVLVS ERGHYSLGKA TDLLGIGRDD LVKVKTDANN
260 270 280 290 300
RIDLKALREE CRRFQDRNTL PLALVGIAGT TETGNVDPLE AMADLAQELG
310 320 330 340 350
CHFHVDAAWG GPTLFSDRHR SLLKGIERAD SVTIDGHKQL YVPMGAGMVV
360 370 380 390 400
FKDPTALSAI EHHANYILRH GSKDLGSHTL EGSRPGKAML VHAGFSIIGR
410 420 430 440 450
KGYELLIDMG IERARTFADM IKQHPDFELI SEPELNILTY RYCPAAVQQT
460 470 480 490 500
LHDVTDRERA DINALLDLVC QLLQKFQREA GKTFVSRTRL HVARHDRELT
510 520 530 540 550
VLRVVLANPL TTDEILESVL AEQCELVQLP EIQAVLQQVE ELCTGLAKAA

SW
Length:552
Mass (Da):61,160
Last modified:August 10, 2010 - v1
Checksum:iBD22CB0295BE5A1C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002031 Genomic DNA. Translation: ADI84544.1.
RefSeqiWP_010942351.1. NC_017454.1.
YP_006890692.1. NC_017454.1.

Genome annotation databases

EnsemblBacteriaiADI84544; ADI84544; KN400_1732.
GeneIDi12439806.
KEGGigsk:KN400_1732.
PATRICi43027492. VBIGeoSul143269_1725.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002031 Genomic DNA. Translation: ADI84544.1 .
RefSeqi WP_010942351.1. NC_017454.1.
YP_006890692.1. NC_017454.1.

3D structure databases

ProteinModelPortali D7AJE0.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADI84544 ; ADI84544 ; KN400_1732 .
GeneIDi 12439806.
KEGGi gsk:KN400_1732.
PATRICi 43027492. VBIGeoSul143269_1725.

Phylogenomic databases

HOGENOMi HOG000282553.
KOi K01580.

Enzyme and pathway databases

BioCyci GSUL663917:GLDN-1675-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "De Novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads."
    Nagarajan H., Butler J.E., Klimes A., Qiu Y., Zengler K., Ward J., Young N.D., Methe B.A., Palsson B.O., Lovley D.R., Barrett C.L.
    PLoS ONE 5:E10922-E10922(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DL-1 / KN400Imported.

Entry informationi

Entry nameiD7AJE0_GEOSK
AccessioniPrimary (citable) accession number: D7AJE0
Entry historyi
Integrated into UniProtKB/TrEMBL: August 10, 2010
Last sequence update: August 10, 2010
Last modified: October 29, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3