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D7AJE0

- D7AJE0_GEOSK

UniProt

D7AJE0 - D7AJE0_GEOSK

Protein
Submitted name:

Pyridoxal-5'-phosphate-dependent decarboxylase

Gene

KN400_1732

Organism
Geobacter sulfurreducens (strain DL-1 / KN400)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 20 (01 Oct 2014)
      Sequence version 1 (10 Aug 2010)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciGSUL663917:GLDN-1675-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Pyridoxal-5'-phosphate-dependent decarboxylaseImported
    Gene namesi
    Ordered Locus Names:KN400_1732Imported
    OrganismiGeobacter sulfurreducens (strain DL-1 / KN400)Imported
    Taxonomic identifieri663917 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter
    ProteomesiUP000000389: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD7AJE0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000282553.
    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D7AJE0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPKNRDAARA SLENLYRIFT VPEAPDSTLG AIDQAISGDV TGFLQTHIVA    50
    IERDLEDIEA NFSSFSIPEE PTYVSEYTEF VKENLVAHSV HTASPAFVGH 100
    MTSALPYFML PLARLMTALN QNVVKVETSK AFTPMERQVL AMLHHLVYRR 150
    DEDFYPSWIH NSRHALGAFC SGGTIANITA LWVARNRLFA PNGAFRGIAQ 200
    EGLARALKHR GADGIAVLVS ERGHYSLGKA TDLLGIGRDD LVKVKTDANN 250
    RIDLKALREE CRRFQDRNTL PLALVGIAGT TETGNVDPLE AMADLAQELG 300
    CHFHVDAAWG GPTLFSDRHR SLLKGIERAD SVTIDGHKQL YVPMGAGMVV 350
    FKDPTALSAI EHHANYILRH GSKDLGSHTL EGSRPGKAML VHAGFSIIGR 400
    KGYELLIDMG IERARTFADM IKQHPDFELI SEPELNILTY RYCPAAVQQT 450
    LHDVTDRERA DINALLDLVC QLLQKFQREA GKTFVSRTRL HVARHDRELT 500
    VLRVVLANPL TTDEILESVL AEQCELVQLP EIQAVLQQVE ELCTGLAKAA 550
    SW 552
    Length:552
    Mass (Da):61,160
    Last modified:August 10, 2010 - v1
    Checksum:iBD22CB0295BE5A1C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002031 Genomic DNA. Translation: ADI84544.1.
    RefSeqiYP_006890692.1. NC_017454.1.

    Genome annotation databases

    EnsemblBacteriaiADI84544; ADI84544; KN400_1732.
    GeneIDi12439806.
    KEGGigsk:KN400_1732.
    PATRICi43027492. VBIGeoSul143269_1725.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002031 Genomic DNA. Translation: ADI84544.1 .
    RefSeqi YP_006890692.1. NC_017454.1.

    3D structure databases

    ProteinModelPortali D7AJE0.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADI84544 ; ADI84544 ; KN400_1732 .
    GeneIDi 12439806.
    KEGGi gsk:KN400_1732.
    PATRICi 43027492. VBIGeoSul143269_1725.

    Phylogenomic databases

    HOGENOMi HOG000282553.
    KOi K01580.

    Enzyme and pathway databases

    BioCyci GSUL663917:GLDN-1675-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "De Novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads."
      Nagarajan H., Butler J.E., Klimes A., Qiu Y., Zengler K., Ward J., Young N.D., Methe B.A., Palsson B.O., Lovley D.R., Barrett C.L.
      PLoS ONE 5:E10922-E10922(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DL-1 / KN400Imported.

    Entry informationi

    Entry nameiD7AJE0_GEOSK
    AccessioniPrimary (citable) accession number: D7AJE0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 10, 2010
    Last sequence update: August 10, 2010
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3